DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment IGDCC4 and igdcc4

DIOPT Version :10

Sequence 1:XP_047288863.1 Gene:IGDCC4 / 57722 HGNCID:13770 Length:1319 Species:Homo sapiens
Sequence 2:XP_002662886.3 Gene:igdcc4 / 100141327 ZFINID:ZDB-GENE-080327-32 Length:1246 Species:Danio rerio


Alignment Length:1339 Identity:624/1339 - (46%)
Similarity:791/1339 - (59%) Gaps:206/1339 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    46 TVELSCGVGPLQVILGPEQAAVLNCSLGAAAAGPPTRVTWSKDGDTLLEHDHLHLLPNGSLWLSQ 110
            :||||||.||:.|:|.|:|..:|:|.|||:.  ||..|||.:||..|.|...:..||||||.:| 
Zfish    27 SVELSCGAGPVHVVLEPDQPLLLDCHLGASE--PPLNVTWLRDGVVLSESQTIRPLPNGSLLIS- 88

Human   111 PLAPNGSDESVPEAVGVIEGNYSCLAHGPLGVLASQTAVVKLATLADFSLHPESQTVEENGTARF 175
            ..:.||     |...|| ||.|.||:....|.|.|:|..:.||:|:.|...||.|.|...|||||
Zfish    89 AFSANG-----PAPAGV-EGGYRCLSSSSAGALTSRTLSLHLASLSRFLQDPEPQIVPVGGTARF 147

Human   176 ECHIEGLPAPIITWEKDQVTLP------EEPRLIVLPNGVLQILDVQESDAGPYRCVATNSARQH 234
            ||:::|||.|.|||||||..||      |..|.|.|||||||||:|.:.|.|.|||||.||||:.
Zfish   148 ECYVDGLPTPSITWEKDQAPLPAPTETIEPSRYISLPNGVLQILEVSKEDEGLYRCVAFNSARKR 212

Human   235 FSQEALLSVAHRGSLASTRGQDVVIVAAPENTTVVSGQSVVMECVASADPTPFVSWVRQDGDSRA 299
            |||:|.|:|    |...::..:|||||.|:|:|||.|:..||||:|..:|.|||||.||      
Zfish   213 FSQDASLTV----SPGLSQESEVVIVAPPQNSTVVMGRPAVMECMAQGEPKPFVSWSRQ------ 267

Human   300 QRVPARGGNEIRTRDGCVCFIRVQSVPEVRRLKGRAVPSVPSSASPSPSPDGKPISTDVIVLGRT 364
                                                              |||||:|||:||. |
Zfish   268 --------------------------------------------------DGKPIATDVVVLA-T 281

Human   365 NLLIANAQPWHSGVYVCRANKPRTRDFATAAAELRVLAAPAITQAPEALSRTRASTARFVCRASG 429
            ||:|.:.:..|:||||||||||:||||.::.|||||||.|.|.|:|||:|.:|.:||||||.:||
Zfish   282 NLVIPDTRSHHAGVYVCRANKPKTRDFVSSPAELRVLAPPIILQSPEAVSLSRGNTARFVCNSSG 346

Human   430 EPRPALRWLHNGAPLRPNGRVKVQGGGGSLVITQIGLQDAGYYQCVAENSAGMACAAASLAVVVR 494
            :|.||||||.||.|::.|.|||.| ..|.|:|.|:.|.|||||||:|.||.|.|||.|.|:|:||
Zfish   347 DPPPALRWLKNGEPVQSNARVKTQ-NPGVLLINQLRLDDAGYYQCIAANSLGTACATAKLSVIVR 410

Human   495 EGLPSAPTRVTATPLSSSAVLVAWERPEMHSEQIIGFSLHYQKARGMDNVEYQFAVNNDTTELQV 559
            |||||.|..|:|||.||::.|:.|:.||.:|:||||||:|||:..|.||:|||||||||||||.|
Zfish   411 EGLPSPPRHVSATPHSSTSALLTWDPPEHNSDQIIGFSVHYQRTAGSDNMEYQFAVNNDTTELHV 475

Human   560 RDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQLSLSSPNPSDIRVAWLPLPPSLS 624
            ::|.|:|.|.|||||||.:||||.|.|..|..|:|||||:|||||.|.:|:||||.||||...||
Zfish   476 KELLPHTAYTFYVVAYSPMGASRPSLPVTVEMLEDVPSASPQLSLLSTSPTDIRVMWLPLSSQLS 540

Human   625 NGQVVKYKIEY-GLGKEDQIFSTEVRGNETQLMLNSLQPNKVYRVRISAGTAAGFGAPSQWMHHR 688
            .|.:.:|:|:| .|.:.|.|:|.||.|||||:.|..|:||:.|::||||||.|||...|:|..|.
Zfish   541 RGAITRYRIDYRALEQVDHIYSVEVGGNETQVTLRDLKPNQAYQLRISAGTRAGFSQSSEWASHH 605

Human   689 TPSMHNQSHVPFAPAELKVQAKMESLVVSWQPPPHPTQISGYKLYWREVGAEEEANGDR-LPGGR 752
            ||   |.:.|.|||.||||:|||.||.|:||.||:.|||:||||.||||..:|..|.:: :...|
Zfish   606 TP---NLTQVLFAPTELKVRAKMHSLHVTWQSPPNHTQITGYKLSWREVDGDELTNEEKPVISER 667

Human   753 GDQAWDVGPVRLKKKVKQYELTQLVPGRLYEVKLVAFNKHEDGYAAVWKGKTEKAPAPDMPIQRG 817
            ..|      ::|:|::|.:|:|.|.|.|||||::.||||..:||.|||||:|||       :.|.
Zfish   668 IQQ------IKLRKRIKHHEVTGLAPDRLYEVRVWAFNKQTEGYPAVWKGRTEK-------LTRV 719

Human   818 ------PPLPPAHVHAESNSSTSIWLRWKKPDFTTVKIVNYTVRFSPWGLRNASLVTYYTSSGED 876
                  |||||..|.|.:||||||||||:||.|:.|:|:|||:|.||.|:||||||:|||||.::
Zfish   720 RTTDSLPPLPPISVRARANSSTSIWLRWEKPHFSNVRIINYTIRCSPAGIRNASLVSYYTSSSQE 784

Human   877 ILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERSTLPDRPSTPPSDLRLSPLTPSTVRLHWCPPT 941
            ||:|.|||||.||.||||:|.||.|||.|.||.||||||||: |.|::||.|...:|.:.|.||.
Zfish   785 ILLGSLKPFTSYEIAVQSNGADMSGPFSSTVEESTLPDRPSS-PVDMQLSALDSFSVLVSWRPPL 848

Human   942 EPNGEIVEYLILYSSNHTQPEHQWTLLTTQGNIFSAEVHGLESDTRYFFKMGARTEVGPGPFSRL 1006
            ||||.::.|.|||:.|.:.|::|||.||..|.:.||||.||.|.|||:|||||.||||.||:|.:
Zfish   849 EPNGVVLTYWILYTPNISHPDYQWTNLTHDGYVTSAEVPGLMSGTRYYFKMGACTEVGVGPYSPV 913

Human  1007 QDVITLQEKLSDSLDMHSVTGIIVGVCLGLLCLLACMCAGLRRSPHRESLPGL-SSTATP----G 1066
            :||.|..:|.  .||:|:||||||||||||||:|.|||...|....|:...|| ||:.:|    |
Zfish   914 KDVYTPPKKY--ELDIHAVTGIIVGVCLGLLCILLCMCISFRNGKTRDVTGGLDSSSLSPQYRKG 976

Human  1067 N-PALYSRARLGPPSPPAAHELESLVHPHPQDWSPPPSDVEDRAEVHSLMG--GGVSEGRSHSKR 1128
            | |...:.|....|.....||||:|:   |.....|...:.:.:|.|||||  |...:|.:..|.
Zfish   977 NRPVPAASAAAAVPDCSDCHELETLM---PSSAQEPSRPLTEPSEEHSLMGNVGAADDGLAEPKP 1038

Human  1129 KISWAQPSGLSWAGS----WAGCELPQAGPRPALTRALLPPAGTGQTLLLQALVYDAIKGNGRKK 1189
                      :|.||    ||.          .:||...........|:           ||..:
Zfish  1039 ----------AWNGSVSRNWAN----------RITRYRDTITEDSSALI-----------NGALE 1072

Human  1190 SPPA--------------CRNQVEAEVIVHSDFS------ASNGNPDLHLQDLEPEDPLPPEAPD 1234
            .||:              .:|||||||||||..|      ....:.:|.|:....:.|.|.|...
Zfish  1073 GPPSENNKSGHVERLYSLSKNQVEAEVIVHSQLSNATVDQGPQSDMELCLESPSSQQPSPGEKAT 1137

Human  1235 LISGVGDPGQGAAWLDRELGGCELAAPGPDRLTCLPEAASASCSYPDLQPGEVLEETPG------ 1293
            ..|...:...            |..:|.|...|.:.|..| :.:.| .:.|.:..:..|      
Zfish  1138 PSSPHSEDNH------------ETQSPSPTPSTHISEVLS-NHNGP-FESGPIGAKNQGVGLTNG 1188

Human  1294 --DSCQLKSP-----------CPLG---ASPGLPRSPVS 1316
              .|..|:|.           ||.|   .|||||.||.|
Zfish  1189 FHSSKPLRSKAETLENGAHRLCPTGKVLPSPGLPASPSS 1227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IGDCC4XP_047288863.1 Ig 66..148 CDD:409353 34/81 (42%)
Ig strand B 66..70 CDD:409353 1/3 (33%)
Ig strand C 82..86 CDD:409353 2/3 (67%)
Ig strand E 104..108 CDD:409353 3/3 (100%)
Ig strand F 131..136 CDD:409353 2/4 (50%)
Ig strand G 145..148 CDD:409353 1/2 (50%)
I-set 158..231 CDD:400151 46/78 (59%)
Ig strand B 173..177 CDD:409353 3/3 (100%)
Ig strand C 186..190 CDD:409353 2/3 (67%)
Ig strand E 208..212 CDD:409353 3/3 (100%)
Ig strand F 222..227 CDD:409353 3/4 (75%)
IG_like 263..400 CDD:214653 51/136 (38%)
Ig strand B 274..278 CDD:409353 2/3 (67%)
Ig strand C 287..291 CDD:409353 3/3 (100%)
Ig 419..491 CDD:472250 44/71 (62%)
Ig strand B 421..425 CDD:143205 3/3 (100%)
Ig strand C 434..438 CDD:143205 3/3 (100%)
Ig strand E 457..461 CDD:143205 2/3 (67%)
FN3 <471..>677 CDD:442628 126/206 (61%)
Ig strand F 471..476 CDD:143205 4/4 (100%)
Ig strand G 484..487 CDD:143205 2/2 (100%)
fn3 701..795 CDD:394996 47/94 (50%)
FN3 819..911 CDD:238020 62/91 (68%)
FN3 919..1011 CDD:238020 49/91 (54%)
PHA03247 <1053..1319 CDD:223021 80/318 (25%)
igdcc4XP_002662886.3 None

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