DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPN1 and ptpn1

DIOPT Version :10

Sequence 1:NP_002818.1 Gene:PTPN1 / 5770 HGNCID:9642 Length:435 Species:Homo sapiens
Sequence 2:NP_001017121.2 Gene:ptpn1 / 549875 XenbaseID:XB-GENE-950442 Length:433 Species:Xenopus tropicalis


Alignment Length:437 Identity:312/437 - (71%)
Similarity:363/437 - (83%) Gaps:11/437 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDND 65
            |:|||||.:.|:..||.:.||:||::||||||:||:|.:||.||||||||||||||||||:||||
 Frog     3 MDMEKEFHEADRKNSWGSNYQEIRNQASDFPCKVARLQENKARNRYRDVSPFDHSRIKLHREDND 67

Human    66 YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEE 130
            |||||||||||||||||||||||||||||||||:|||||.||||||||:||||:|||||||:||:
 Frog    68 YINASLIKMEEAQRSYILTQGPLPNTCGHFWEMIWEQKSIGVVMLNRVIEKGSIKCAQYWPKKED 132

Human   131 KEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFL 195
            ..|:|:|:||||||:|||||||||:|||.||||:|||||||||||||||||||||||||||||||
 Frog   133 NSMVFDDSNLKLTLLSEDIKSYYTIRQLMLENLSTQETREILHFHYTTWPDFGVPESPASFLNFL 197

Human   196 FKVRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGL 260
            |||||||||:||:||:||||||||||||||||||||||||||||||||||||:|||||||:||||
 Frog   198 FKVRESGSLNPEYGPIVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKQVLLEMRKYRMGL 262

Human   261 IQTADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPHNGKC- 324
            ||||||||||||||||||||||||||||:||||||:|||:|||||.|||||||||..|..|||. 
 Frog   263 IQTADQLRFSYLAVIEGAKFIMGDSSVQEQWKELSNEDLDPPPEHTPPPPRPPKRTTETPNGKVY 327

Human   325 --REFFPNHQWVKEETQEDKDCPIKEE--KGSPLNAAPYGIESMSQDTEVRSRVVGGSLRGAQAA 385
              .||||  |.:.||........::|.  .|:.|::.....||...|||:|.|||...:.    :
 Frog   328 EQSEFFP--QQIVEEVIRRAVSVVEESVPDGTILSSPQQPAESTRPDTEIRRRVVDDQVH----S 386

Human   386 SPAKGEPSLPEKDEDHALSYWKPFLVNMCVATVLTAGAYLCYRFLFN 432
            :|:..|....|.::::....||.|::|:|:..||||||.|.||..::
 Frog   387 NPSPEEKLKSESEDNNKGPEWKSFVMNICMFAVLTAGACLLYRVWYH 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPN1NP_002818.1 PTPc-N1 16..292 CDD:350456 242/275 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..359 3/22 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..398 3/19 (16%)
ptpn1NP_001017121.2 PTP_DSP_cys 18..294 CDD:475123 242/275 (88%)

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