DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPN1 and ptpn1

DIOPT Version :10

Sequence 1:NP_002818.1 Gene:PTPN1 / 5770 HGNCID:9642 Length:435 Species:Homo sapiens
Sequence 2:NP_570999.2 Gene:ptpn1 / 30081 ZFINID:ZDB-GENE-980605-23 Length:433 Species:Danio rerio


Alignment Length:451 Identity:285/451 - (63%)
Similarity:336/451 - (74%) Gaps:39/451 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     3 MEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQEDNDYI 67
            ||.||.:||:.|:|..:||:||.::||.||::||||:|::|||||||||||||||.|....||||
Zfish     1 MEAEFREIDEHGNWNDVYQEIRQQSSDLPCKIAKLPENRSRNRYRDVSPFDHSRICLQIGCNDYI 65

Human    68 NASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYWPQKEEKE 132
            |||||.:|||||.||||||||||||||||||||||:||||||||||:||||:||||||||:||:|
Zfish    66 NASLISVEEAQRKYILTQGPLPNTCGHFWEMVWEQRSRGVVMLNRVIEKGSVKCAQYWPQREERE 130

Human   133 MIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFK 197
            .:|||||.:|||||||:||||||||||||||:|||||||||||||||||||||||||||||||||
Zfish   131 AVFEDTNFRLTLISEDVKSYYTVRQLELENLSTQETREILHFHYTTWPDFGVPESPASFLNFLFK 195

Human   198 VRESGSLSPEHGPVVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQ 262
            |||||.||||.|||||||||||||||||||.|||||||.:|||||||.|::||||||::||||||
Zfish   196 VRESGCLSPELGPVVVHCSAGIGRSGTFCLVDTCLLLMSQRKDPSSVRIQEVLLEMRRYRMGLIQ 260

Human   263 TADQLRFSYLAVIEGAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPHNGKCREF 327
            |||||||||||.|||||:||||:|||:.|||||:|: :.||| :.||||||.|| :|.|||  ..
Zfish   261 TADQLRFSYLAFIEGAKYIMGDTSVQESWKELSNEE-DLPPE-LTPPPRPPPRI-DPPNGK--GD 320

Human   328 FPN----HQWVKEETQEDKDCPIKEEKGSPLNAAPYGIESMSQDTEVRSRVVGGSLRGAQAASPA 388
            ..|    |.:.:..|...:.|         .|:||   ::.:...|:|.|.|...:......:..
Zfish   321 LGNSDLAHLFTESITNSAEIC---------ANSAP---KTFTDGPEIRKRTVPAEVGALPLVNEQ 373

Human   389 KGEPSLP-----------------EKDEDHALSYWKPFLVNMCVATVLTAGAYLCYRFLFN 432
            ..||.:|                 |.....|...|.|.:|::|:.|.|..||| |||..|:
Zfish   374 PDEPIIPREAPPKPPRSPPLTPATEAPTTAAQEAWSPLVVSLCLCTALAVGAY-CYRTYFH 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPN1NP_002818.1 PTPc-N1 16..292 CDD:350456 228/275 (83%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..359 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..398 4/36 (11%)
ptpn1NP_570999.2 PTPc-N1 14..290 CDD:350456 228/275 (83%)

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