DRSC/TRiP Functional Genomics Resources

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Protein Alignment PTPN1 and pyp3

DIOPT Version :10

Sequence 1:NP_002818.1 Gene:PTPN1 / 5770 HGNCID:9642 Length:435 Species:Homo sapiens
Sequence 2:NP_594934.1 Gene:pyp3 / 2541443 PomBaseID:SPAC11E3.09 Length:303 Species:Schizosaccharomyces pombe


Alignment Length:273 Identity:99/273 - (36%)
Similarity:152/273 - (55%) Gaps:36/273 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    33 RVAKLPKNK-NRNRYRDVSPFDHSRIKLH---QEDNDYINASLIKMEEAQRSYILTQGPLPNTCG 93
            |:.||.|.. .||||.::.|::::|::|.   :|..||||||::|:... :::|.||||..|:..
pombe    41 RLPKLSKKALARNRYSNIVPYENTRVRLDPMWKEACDYINASIVKIPSG-KTFIATQGPTSNSID 104

Human    94 HFWEMVWEQ--KSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNL-KLTLISEDIKSYYT- 154
            .||:|||:.  ||..:|||.::.|:..|||..|||.:     :||..|: .|::|   :...|| 
pombe   105 VFWKMVWQSVPKSGIIVMLTKLRERHRLKCDIYWPVE-----LFETLNIGDLSVI---LVKVYTL 161

Human   155 -------VRQLELENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSP--EHGP 210
                   ||:.||.....:  ::||||:|..|||||.|.: .|.|: |.:..:|.|.||  |..|
pombe   162 TSLNEVQVREFELNKDGVK--KKILHFYYNGWPDFGAPHT-FSLLS-LTRYIKSLSYSPDFETAP 222

Human   211 VVVHCSAGIGRSGTFCLADTCLLLMDKRKDPSSVD---IKKVLLEMRKFRMGLIQTADQLRFSYL 272
            ::||||||.||:|||......|...|.....|..:   |..::..:|..||..:|:.|||.|.|.
pombe   223 IIVHCSAGCGRTGTFMALFEILSQTDDSTSTSKFEVDNIANIVSSLRSQRMQSVQSVDQLVFLYT 287

Human   273 A---VIEGAKFIM 282
            .   :::|.:|::
pombe   288 VSQELLQGKEFLL 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTPN1NP_002818.1 PTPc-N1 16..292 CDD:350456 99/273 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 338..359
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..398
pyp3NP_594934.1 PTPc 29..288 CDD:214550 97/259 (37%)
Blue background indicates that the domain is not in the aligned region.

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