DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DDX55 and CG32344

DIOPT Version :10

Sequence 1:XP_016875199.1 Gene:DDX55 / 57696 HGNCID:20085 Length:618 Species:Homo sapiens
Sequence 2:NP_612028.4 Gene:CG32344 / 326208 FlyBaseID:FBgn0052344 Length:827 Species:Drosophila melanogaster


Alignment Length:696 Identity:175/696 - (25%)
Similarity:293/696 - (42%) Gaps:159/696 - (22%)


- Green bases have known domain annotations that are detailed below.


Human     7 GSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEIL 71
            |.::|:.:..  :::..:.:.|:...||:|..||||.:..:||.|.|.||||||..|:||:.|.|
  Fly    39 GGFQSMGLGF--ELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKL 101

Human    72 LRREEKLKKSQVGAIIITPTRELAIQIDEVLSHFTKHFPEFSQILWIGGRNPGEDVERFKQQGGN 136
            .|||   ......|:|::||||||:|..:.:....: |.|...||.:||.:........ ....:
  Fly   102 QRRE---PTKGARALILSPTRELAVQTYKFIKELGR-FMELKSILVLGGDSMDSQFSAI-HTCPD 161

Human   137 IIVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMGFEASINTILEFLPKQRRTGLF 201
            :|||||||    |......:||.  :.|::.:|.||||||.:|||...:|..|..||..|:|.:|
  Fly   162 VIVATPGR----FLHLCVEMDLK--LNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMF 220

Human   202 SATQTQEVENLVRAGLRNPV--RVSVKEKGVAASSAQKTPSRLENYYMVCKADEKFNQLVHFLRN 264
            |||..:.:....||||.:||  |:.|:         .|.|..|...::.|:.|:::..||..|:.
  Fly   221 SATLPKLLVEFARAGLNDPVLIRLDVE---------SKLPDALALKFLYCRPDDRYTALVVLLKY 276

Human   265 --HKQEKHLVFFRYSSGLCGRGIRDSARMCSTCACVEYYGKALEVLV--KGVKIMCIHGKMKYKR 325
              ..|.:.:||                      |..:::.:.:..::  .|:....::..:....
  Fly   277 VIPVQSQTVVF----------------------AGTQHHVELISYILTEAGISNASVYSSLDPAA 319

Human   326 NKI-FMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTARIGHGGSALVF 389
            .|| ..:|...:..:|:.|||.|||||||.:::|:....|.....||||.||.||.|..|:|...
  Fly   320 RKINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSI 384

Human   390 LLPMEESYI--NFLAINQKCPLQEMK-----PQRNTADLLPKLKSMALAD-------RAVFEKGM 440
            :...:.:::  ..|.:|:...:.:..     ||    |||.: :.:.:.|       ..|.....
  Fly   385 VSTDDTAHLLDLHLFLNRPFNIHDSSALGTIPQ----DLLEE-EHLTVTDIKKSHHIAGVLRTSE 444

Human   441 KAFVSYVQAYAKHECNLIFRLKDLDFASLARGFALLRMPKMPELRGKQFPDF---VPV-----DV 497
            .|:..|:.:......:...|:|.:.|      |||           |...||   .||     :.
  Fly   445 NAYKKYLSSRPVASTDANARVKKIKF------FAL-----------KPLEDFFTAAPVLAQAAEA 492

Human   498 NTDTIPFKDKIREKQRQKLLEQQR----REKTENEGRRKFIKNKAWSKQKA-----KKEKKKK-- 551
            :..:...:.|:...:| ||.|::.    :.::...|...|..|   :.||:     .|||:.:  
  Fly   493 SGQSTESQAKVSAAER-KLQEEKHDILVKMRSFRPGGTVFELN---TTQKSTQFIVMKEKRMQHA 553

Human   552 --MNEKRKREEGSDIEDE------------------------------------DMEELLNDTRL 578
              :|:.|::....||::|                                    :|:.|..|...
  Fly   554 EVINKFRQQRAEEDIDEEKKTIEALNPSSGRMPTADEEAISSTFNKVVAPKRLQNMDALYKDKPK 618

Human   579 LKKLKKGKITEEEF----------EKGL-LTTGKRTIKTVDLGISD 613
            .||.|.....|:.:          |.|| :...:|..:..:..:||
  Fly   619 KKKRKINSKDEDHYVPYQSADKHTEDGLAINNFERQAQNAEFSVSD 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX55XP_016875199.1 SrmB 16..438 CDD:440279 129/442 (29%)
DEADc_DDX55 20..224 CDD:350718 79/205 (39%)
DUF4217 423..480 CDD:464056 10/63 (16%)
CG32344NP_612028.4 DEADc_DDX54 39..243 CDD:350717 80/216 (37%)
SrmB 41..449 CDD:440279 131/456 (29%)
DBP10CT <679..721 CDD:462373
Blue background indicates that the domain is not in the aligned region.

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