DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRRC4C and Fili

DIOPT Version :9

Sequence 1:NP_001245348.1 Gene:LRRC4C / 57689 HGNCID:29317 Length:640 Species:Homo sapiens
Sequence 2:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRRC4CNP_001245348.1 LRRNT 47..80 CDD:214470
PPP1R42 65..235 CDD:411060
LRR 1 77..98
leucine-rich repeat 78..101 CDD:275380
LRR 2 101..122
leucine-rich repeat 102..125 CDD:275380
LRR 3 125..146
leucine-rich repeat 126..149 CDD:275380
LRR 4 149..170
leucine-rich repeat 150..173 CDD:275380
LRR 5 173..195
leucine-rich repeat 174..198 CDD:275380
LRR 6 198..219
leucine-rich repeat 199..220 CDD:275380
LRR_8 220..279 CDD:404697
LRR 7 220..241
leucine-rich repeat 221..244 CDD:275380
LRR 8 244..265
leucine-rich repeat 245..268 CDD:275380
LRR_8 267..>301 CDD:404697
LRR 9 268..289
leucine-rich repeat 269..290 CDD:275380
LRRCT 301..>339 CDD:214507
IG 360..443 CDD:214652
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 463..483
FiliNP_001369108.1 leucine-rich repeat 75..97 CDD:275378
leucine-rich repeat 98..121 CDD:275380
LRR_8 120..180 CDD:404697
leucine-rich repeat 122..145 CDD:275380
leucine-rich repeat 146..169 CDD:275380
LRR <161..>354 CDD:227223
leucine-rich repeat 170..193 CDD:275380
leucine-rich repeat 194..217 CDD:275380
leucine-rich repeat 218..265 CDD:275380
leucine-rich repeat 266..289 CDD:275380
leucine-rich repeat 290..313 CDD:275380
leucine-rich repeat 314..338 CDD:275380
LRR_8 337..397 CDD:404697
leucine-rich repeat 339..360 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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