DRSC/TRiP Functional Genomics Resources

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Protein Alignment ALS2 and CG3306

DIOPT Version :10

Sequence 1:NP_065970.2 Gene:ALS2 / 57679 HGNCID:443 Length:1657 Species:Homo sapiens
Sequence 2:NP_648335.1 Gene:CG3306 / 39116 FlyBaseID:FBgn0036016 Length:288 Species:Drosophila melanogaster


Alignment Length:303 Identity:62/303 - (20%)
Similarity:96/303 - (31%) Gaps:112/303 - (36%)


- Green bases have known domain annotations that are detailed below.


Human  1100 YVGHWKEGKMCGQGVYSYASGEVFEGCFQDNMRHGHGLLRSGKLTSSSPSMFIGQWVMDKKAGYG 1164
            |||...|..|...|||.|..|..:.|.|.:|..||.|.::                         
  Fly    23 YVGPSDELGMQEMGVYIYPDGTCYTGEFLNNRFHGKGTIQ------------------------- 62

Human  1165 VFDDITRGEKYMGMWQDDVCQGNGVVVTQFGLYYEGNFHLNKMMGNGVLLSEDDTIY------EG 1223
                                     :....|:.|:...|      ||.|:|.|...:      :.
  Fly    63 -------------------------IPDSLGVTYQVTHH------NGRLVSIDQVNFNDSLPVDF 96

Human  1224 EFSDDWTLSGK-GTLTMPNGDYIEGYFSGEWGSGIKITGTYFKPSLYESDKDRPKV--------- 1278
            |..|.:|:|.| .|...|.    :..|..|....:...|    |:.::| ||.|..         
  Fly    97 EMKDHYTMSFKPWTYCTPE----DRRFYQETKEPMDAVG----PNKFQS-KDGPNPLNLGRNIFD 152

Human  1279 --FRKLGNLAVPADEKWKAVFDECWRQLGCEGPGQGEVWKAW--DNIAVALTTSRRQHRDSPEIL 1339
              |..|||.....|.|   .|......|||...      :.|  :|.|.. ..|:|.|:.  ::|
  Fly   153 LGFGLLGNRGFMLDTK---TFSNQSIYLGCREA------RRWIRENCAHG-PLSKRHHKQ--KLL 205

Human  1340 SRSQTQTLESLEFIPQHVGAFSVEKYDDIRKYLIKACDTPLHP 1382
            :|...:.:.:.:   ::.|...       |:::     |.:||
  Fly   206 ARFAREIIRNNQ---ENAGCSQ-------REFM-----TKIHP 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALS2NP_065970.2 ATS1 <39..219 CDD:444065
RCC1 1. /evidence=ECO:0000305 59..108
RCC1 2. /evidence=ECO:0000305 109..167
RCC1 3. /evidence=ECO:0000305 169..218
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..480
RCC1 4. /evidence=ECO:0000305 525..576
ATS1 <527..>683 CDD:444065
RCC1 5. /evidence=ECO:0000305 578..627
RhoGEF 695..879 CDD:470622
PH_alsin 905..1010 CDD:241423
COG4642 <1049..1249 CDD:443680 31/155 (20%)
MORN 1 1049..1071
MORN 2 1072..1094
MORN 3 1100..1122 10/21 (48%)
MORN 4 1123..1145 6/21 (29%)
MORN 5 1151..1173 0/21 (0%)
MORN 6 1175..1197 1/21 (5%)
MORN 7 1198..1220 7/21 (33%)
MORN 8 1221..1244 7/29 (24%)
VPS9 1552..1656 CDD:460489
CG3306NP_648335.1 COG4642 <20..>79 CDD:443680 20/111 (18%)
Blue background indicates that the domain is not in the aligned region.

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