DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EP400 and brm

DIOPT Version :10

Sequence 1:NP_056224.3 Gene:EP400 / 57634 HGNCID:11958 Length:3123 Species:Homo sapiens
Sequence 2:NP_001261906.1 Gene:brm / 39744 FlyBaseID:FBgn0000212 Length:1658 Species:Drosophila melanogaster


Alignment Length:2581 Identity:479/2581 - (18%)
Similarity:752/2581 - (29%) Gaps:1183/2581 - (45%)


- Green bases have known domain annotations that are detailed below.


Human    30 AHPNPPPSPAAPFAPSA-SPSAPQSPSYQIQQLMNRSPATGQNVNITLQSVGPVVGGNQQITLAP 93
            |.|:|..||..|  |.| ||.||.|.|                                      
  Fly     2 ASPSPANSPMPP--PQAPSPMAPPSQS-------------------------------------- 26

Human    94 LPLPSPTSPGFQFSAQPRRFEHGSPSYIQVTSPLSQQVQTQSPTQPSPG-PGQALQNVRAGAPGP 157
             |.|||.||          :.|..|      .||      |.|  |.|| ||.....::.|.||.
  Fly    27 -PAPSPHSP----------YPHQQP------GPL------QGP--PPPGHPGAYGHPMQHGPPGQ 66

Human   158 GLGLCSSSPTGGFVDASVLVRQISLSPSSGGHFVFQDGSGLTQIAQGAQVQLQHPGTPITVRERR 222
            |                           ..||.:                               
  Fly    67 G---------------------------PPGHHM------------------------------- 73

Human   223 PSQPHTQSGGTIH----HLGPQSPAAAGGAGLQPLASPSHITTANLPPQISSIIQGQLVQQQQVL 283
              .||.|  |.|.    |:|.|.|..  |..:.|.  .:|....|.|.|...:..|         
  Fly    74 --PPHHQ--GMIFSKGPHMGMQMPPT--GPNMSPY--QTHGMPPNAPTQPCIVSPG--------- 121

Human   284 QGPPLPRPLGFERTPGVLLPGAGGAAGFGMTSPPPPTSPSRTAVPPGLSSL--PLTSVGNTGMKK 346
             |||                  ||        ||||...|:    ..|.:|  .:.|:...|:::
  Fly   122 -GPP------------------GG--------PPPPERSSQ----ENLHALQRAIDSMEEKGLQE 155

Human   347 VPKKLEEIPPASPEMAQMRKQCLDYHYQEMQALKEVFKEYLIELFFLQHFQGNMMDFLAFKKKHY 411
            .|:                       |.::.|::...|.        ||..||.::.|..:...|
  Fly   156 DPR-----------------------YSQLLAMRATSKH--------QHLNGNQVNLLRTQITAY 189

Human   412 APLQAYLRQNDLDIEEEEEEEEEEEEKSEVINDEQQALAGSLVAGAGSTVETDLFKRQQAMPSTG 476
            ..|   .|...:.::                  .||||                    ||     
  Fly   190 RLL---ARNKPISMQ------------------MQQAL--------------------QA----- 208

Human   477 MAEQSKRPRLEVGHQGVVFQHPGADAGVPLQQLMPTAQ-GGMPPTPQAAQLAGQRQSQQQYDPST 540
             |:|...|...:|       .|||..|.|     |.:| .|.||.|.        |.|||..||.
  Fly   209 -AQQQPPPGPPIG-------PPGAPGGPP-----PGSQHAGQPPVPP--------QQQQQPPPSA 252

Human   541 G-PPVQNAASLHTPL-PQLPGRLPPAGVPTAALSSALQFAQQPQVVEAQTQLQIPVKTQQPNVPI 603
            | ||..:......|. |.:||:......|...:........||..|....    |::.|||    
  Fly   253 GTPPQCSTPPASNPYGPPVPGQKMQVAPPPPHMQQGQPLPPQPPQVGGPP----PIQQQQP---- 309

Human   604 PAPPSSQLPIPPSQPAQLALHVPTPGKVQVQASQLSSLPQMVASTRLPVDPAPPCPR-PLPTSST 667
            |.....|...||.:|.|..|  |..||      .||..|. .....:|..|..|..| .||....
  Fly   310 PQQQQQQSQPPPPEPHQHQL--PNGGK------PLSMGPS-GGQPLIPSSPMQPQVRGTLPGMPP 365

Human   668 SSLAPVSGSGPGPS-PARSSPVNRPSSATNKA----LSPVT---SRTPGVVASAPTKPQSPAQ-N 723
            .|..|..|.||... |....|:.:|:..|..|    |.|:|   .|...:.|....:.|...: .
  Fly   366 GSQVPQPGGGPQRQVPPAGMPMPKPNRITTVAKPVGLDPITLLQERENRIAARISLRMQELQRLP 430

Human   724 ATSSQD----------------------------SSQDTLTEQITLENQVHQRI-AELRKAGLWS 759
            ||.|:|                            :.:||     |||..::.:: ...::.||..
  Fly   431 ATMSEDLRLQAAIELRALRVLNFQRQLRMEFVQCTRRDT-----TLETALNIKLYKRTKRQGLRE 490

Human   760 QRRLPKLQ-------EAPRPKSHWDYLLEEMQWMATDFAQERRWKVAAAKKLVRTVVRHHEEKQL 817
            .|...||:       |..|.:.|.::|...:| ...|..:..|...|...::.:.|:.||...: 
  Fly   491 ARATEKLEKQQKLEAERKRRQKHLEFLAAVLQ-HGKDLREFHRNNKAQLARMNKAVMNHHANAE- 553

Human   818 REERGKKE--EQSRLRRIAASTAR-------------------EIECFWSNIEQVVEIKLRVELE 861
            ||::.::|  |:.|:||:.|....                   :.:.:.||:.|:|:.....:::
  Fly   554 REQKKEQERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAFLLSQTDEYISNLTQMVKQHKDDQMK 618

Human   862 EKRKKALNLQKVSRRGKELRPKG-FDALQESSLDSGM--------SGRKRKASISLTDDE----- 912
            :|.::...|.:..   |||...| :..:.|.|:.:.|        :|:|      ||.|:     
  Fly   619 KKEEEGKRLIQFK---KELLMSGEYIGIDEGSIVADMRVHVVEQCTGKK------LTGDDAPMLK 674

Human   913 --------------VDDEEETIEEEEANEGVVDHQTELSNLAKEAELPLLDLMKLYEGAFLPSSQ 963
                          :||||::....:      ||                               
  Fly   675 HLHRWLNMHPGWDWIDDEEDSCGSND------DH------------------------------- 702

Human   964 WPRPKPDGEDTSGEEDAD--DCPGDRESRKDLVL---IDSLFIMDQFKAAERMNIGKPNAKDIAD 1023
              :||.:.:.|:.|:..|  ...|:.|..|||:.   ::.    |:::..|:            .
  Fly   703 --KPKVEEQPTATEDATDKAQATGNDEDAKDLITKAKVED----DEYRTEEQ------------T 749

Human  1024 VTAVAEAILPKGSARVTTSVKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTV 1088
            ..::|..|..|        |...|..::.|.|::||..||:||..||..|||||||||.|||||:
  Fly   750 YYSIAHTIHEK--------VVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTI 806

Human  1089 QIIAFFAHLACNEGNWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKR--QEWAE 1151
            |.|:...:|...:...||:|::|....:..|.||.::|.|.:.::||.||.   :.:|  |....
  Fly   807 QTISLVTYLMDRKKVMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSP---QGRRLLQNQMR 868

Human  1152 PNSFHVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKG-------MTERHWEAVFTLQSQQRLL 1209
            ...|:|.:|:|....:......:::||.::|||..|:|.       :...|:.|.:      |||
  Fly   869 ATKFNVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPY------RLL 927

Human  1210 LIDSPLHNTFLELWTMVHFLVPGISR------PYLSSPLRAPSEE---SQDYYHKVVIRLHRVTQ 1265
            |..:||.|...|||.:::||:|.|.:      .:.::|.....|:   :::....::.|||:|.:
  Fly   928 LTGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLHKVLR 992

Human  1266 PFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALY-----EDVILQPGTQEALK-SGHFVNVLSI 1324
            ||:|||.|::||.||..|.|:::||.:|..|:.||     :.|:|..|:::... .|....:::.
  Fly   993 PFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKHGKGGAKALMNT 1057

Human  1325 LVRLQRICNHPGLVEPRHPGSSYVAGPLEYPSASLILKALERDFWKEADLSMFDLIGLENKITRH 1389
            :|:|:::||||                                                      
  Fly  1058 IVQLRKLCNHP------------------------------------------------------ 1068

Human  1390 EAELLSKKKIPRKLMEEISTSAAPAARPAAAKLKASRLFQPVQYGQKPEGRTVAFPSTHPPRTAA 1454
                                                                             
  Fly  1069 ----------------------------------------------------------------- 1068

Human  1455 PTTASAAPQGPLRGRPPIATFSANPEAKAAAAPFQTSQASASAPRHQPASASSTAASPAHPAKLR 1519
                                                                             
  Fly  1069 ----------------------------------------------------------------- 1068

Human  1520 AQTTAQASTPGQPPPQPQAPSHAAGQSALPQRLVLPSQAQARLPSGEVVKIAQLASITGPQSRVA 1584
                                                                             
  Fly  1069 ----------------------------------------------------------------- 1068

Human  1585 QPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSVLQIVSAPGQPYLRAPGPVVMQTVSQAGA 1649
                          |...|                                              
  Fly  1069 --------------FMFQH---------------------------------------------- 1073

Human  1650 VHGALGSKPPAGGPSPAPLTPQVGVPGRVAVNALAVGEPGTASKPASPIGGPTQEEKTRLLKERL 1714
                                                                             
  Fly  1074 ----------------------------------------------------------------- 1073

Human  1715 DQIYLVNERRCSQAPVYGRDLLRICALPSHGRVQWRGSLDGRRGKEAGPAHSYTSSSESPSELML 1779
                 :.|:.|.....:|                                               
  Fly  1074 -----IEEKYCDHTGGHG----------------------------------------------- 1086

Human  1780 TLCRCGESLQDVIDRVAFVIPPVVAAPPSLRVPRPPPLYSHRMRILRQGLREHAAPYFQQLRQTT 1844
                                  ||:.|...||                                 
  Fly  1087 ----------------------VVSGPDLYRV--------------------------------- 1096

Human  1845 APRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILMLDILEMFLNFHYLTYVRID 1909
                            |||.|.|..:|.|||:...|||:..||...:.|:|.:|.:....|:|:|
  Fly  1097 ----------------SGKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLD 1145

Human  1910 ENASSEQRQELMRSFN-RDRRIFCAILSTHSRTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDR 1973
            ....:|.|.||:|.|| :...:|..:|||.:...|:||..|||||.:|:|.||..|.:||:...|
  Fly  1146 GTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHR 1210

Human  1974 IGRCKDIHIYRLVSGNSIEEKLLKNGTKDL-IREVAAQGNDYSMAFLTQRTIQELFEVYSPMDDA 2037
            ||:..::.:.||::.||:||::|......| :.|...|...:... .|....|:..:.....||.
  Fly  1211 IGQRNEVRVLRLMTVNSVEERILAAARYKLNMDEKVIQAGMFDQK-STGSERQQFLQTILHQDDN 1274

Human  2038 GFPVKAEEFVVLSQEPSVTETIAPKIARPFIEALKSIEYLEE-DAQKSAQEGVLGPHTDALSSDS 2101
                :.||    ..|....|.|...|||    :.:.||..:. ||::..::..:.|..:.|..:|
  Fly  1275 ----EEEE----ENEVPDDEMINMMIAR----SEEEIEIFKRMDAERKKEDEEIHPGRERLIDES 1327

Human  2102 E---------------NMPCDEEP-----SQLEELADFMEQLTPIEKYALNYLELFHTSIEQEKE 2146
            |               :...||:.     |:..:..|:.:.||..|     :|:......|.::|
  Fly  1328 ELPDWLTKDDDEVERFHYQYDEDTILGRGSRQRKEVDYTDSLTEKE-----WLKAIDDGAEFDEE 1387

Human  2147 RNSEDAVMTAVRAWEFWNLKTLQEREARLRLEQEEAELLTYTREDAYSME-------------YV 2198
            ...:|:              ..:.|:.:.|.|:.:.:.|...|....:::             .:
  Fly  1388 EEEDDS--------------KRKRRKRKNRKEESDDDSLILKRRRRQNLDKRSKKQMHKIMSAVI 1438

Human  2199 YEDVDGQTEVMPLWTPPTPP--------------------------------------------- 2218
            ..:.||:|...|....|:..                                             
  Fly  1439 KHNQDGRTLSEPFMKLPSRQRLPDYYEIIKRPVDIKKILQRIEDCKYADLNELEKDFMQLCQNAQ 1503

Human  2219 ---QDDSDIYLDSVMCLMYEATPIPEAKLPPVYV-RKERKRHKTDPS--AAGRKKKQRHGEAVVP 2277
               ::.|.|||||:             .|..|:| .::|.....|.:  |||....:.||..   
  Fly  1504 IYNEEASLIYLDSI-------------ALQKVFVGARQRITAAADAAAVAAGDNTGEAHGNG--- 1552

Human  2278 PRSLFDRATPGLLKIRREGKEQKKNILLKQQVPFAKPLPTFAKPTAEPGQDNPEWLISEDWALLQ 2342
                              |.:...|                  ...:.|.|..:   .|:.|...
  Fly  1553 ------------------GSDNSDN------------------DDDDGGDDGSD---DEEIATTS 1578

Human  2343 AVKQLLELPLNLTIVSPAHTPNWDLVSDVVNSCSRIYRSSKQCRNR 2388
            |....::|.||.::.|...||. ...|:|  |......|.||.|.:
  Fly  1579 AAAVKMKLKLNKSLASAPATPT-QSSSNV--SSGAATTSKKQTRRK 1621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EP400NP_056224.3 EP400_N 1..469 CDD:434938 83/446 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..65 14/35 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 125..154 9/29 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 212..261 12/52 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 282..359 15/78 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 509..558 17/51 (33%)
PAT1 518..>780 CDD:401645 76/309 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..622 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 648..734 26/123 (21%)
HSA 764..835 CDD:214727 20/79 (25%)
HepA 849..>1338 CDD:440319 142/545 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 879..931 15/79 (19%)
Interactions with RUVBL1 and RUVBL2 915..1329 120/442 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 961..988 6/28 (21%)
DEAD-like_helicase_N 1055..1271 CDD:475120 77/233 (33%)
DEAH box-like 1183..1186 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1431..1546 0/114 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1751..1771 0/19 (0%)
SF2_C_SNF 1861..1986 CDD:350180 50/125 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2083..2108 4/39 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2251..2275 7/25 (28%)
Interaction with ZNF42. /evidence=ECO:0000250 2488..2753
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2488..2566
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2629..2652
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2785..2833
SP1-4_N <2840..3065 CDD:425404
PRK12323 <3004..>3123 CDD:481241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3079..3123
brmNP_001261906.1 QLQ 173..202 CDD:462622 7/49 (14%)
Pro-rich <247..401 CDD:464580 47/170 (28%)
PTZ00121 <477..651 CDD:173412 36/178 (20%)
HSA 501..573 CDD:214727 18/73 (25%)
BRK 650..691 CDD:462196 6/46 (13%)
PLN03142 739..>1368 CDD:215601 203/1171 (17%)
Bromo_SNF2L2 1425..1530 CDD:99947 14/117 (12%)
Blue background indicates that the domain is not in the aligned region.

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