DRSC/TRiP Functional Genomics Resources

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Protein Alignment LRRN1 and Fili

DIOPT Version :10

Sequence 1:NP_065924.3 Gene:LRRN1 / 57633 HGNCID:20980 Length:716 Species:Homo sapiens
Sequence 2:NP_001369108.1 Gene:Fili / 5740472 FlyBaseID:FBgn0085397 Length:789 Species:Drosophila melanogaster


Alignment Length:675 Identity:154/675 - (22%)
Similarity:270/675 - (40%) Gaps:102/675 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     6 FVIAACQLVLGLLMTSLTESSIQNSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNL 70
            ::..|..::|.||:|.:.......:.||..|.|     ...::..|..    |.|..|..:|..|
  Fly    16 WLCGAIPVLLLLLLTLVILPPETTAFCPSKCQC-----LGGEANSRAL----CVDAALEDVPIQL 71

Human    71 SSDTQVLLLQSNNIAKTVDELQQLFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMT 135
            :.:|:.:.|..|.|......|.....|..||.|||....:........::|.||:|..|.::.:.
  Fly    72 NPETKYINLTVNRIRTLEFSLPFYMKLEILDLSQNIIETLGSKNFEYQSELRTLNLSRNLVSSLH 136

Human   136 DYCLQDLSNLQELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGE 200
            .:..:.|:||..|.::.|:|.|:...|.:.|.:|:.|.|.:|.:..::...|.....||:|:...
  Fly   137 KHAFKGLTNLLLLDLSFNRIETVHPTALSDLASLVELDLTNNNIVSLEDNCFKGMNTLEVLVFRN 201

Human   201 NPVIGI-------------LDM-----------NFKPLANLRSLVLAGMYLTDIPGNALVGLDSL 241
            |.::.:             |||           :|:.|..|.:|.:.|..::::..:|..||.||
  Fly   202 NRLLDVPASNLWHLHALKSLDMSLNLVEFVRNDSFEGLKELLALSVQGNVMSELDLSAFEGLISL 266

Human   242 ESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMGELVSVDRY 306
            :.|...||.|..||...|.|:.||.:|:|..|...::....|.|:..|:||.::.:..|..:|..
  Fly   267 KHLDLSDNNLTMVPTQQLSKLSNLTYLNLGGNRFSQLPAVAFLNLFHLRELHLSRLDFLQRIDSR 331

Human   307 ALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAIYQKTVESLPNLREISIHSN 371
            |..:...|..|...|||:||.|....|:..|.:..:.:.:|:|..:|.... .:..|:::.:..|
  Fly   332 AFVDNTHLQTLHLNNNPQLSDIPMRLFQGNPNILEVYMQSNSLQTLYSAQF-PVDQLQKLYLGDN 395

Human   372 PLRCDCVIHWINSNKT-NIRFMEPLSMFCAMPPEYKGHQV----KEVLIQDSSEQCLPMISHDSF 431
            ||:|:|.:.|:....| |...::|.....|      |..|    ||...::.:::...:.|.|..
  Fly   396 PLQCNCSLLWLWRLVTGNFEGVDPGMEHAA------GGAVAALAKEADDEELADEATAVASTDDG 454

Human   432 PNRLNVDIGTTVFLDCRAMAEPEPEIYWVT----------------PIGNKITVETLSDKYKL-- 478
            ...|...|.....::  |:...||..|.:.                .||..|..:.:..:.||  
  Fly   455 VAALAAYIAEQHIVN--ALHTTEPSAYELATSSSNRNSGILRMDRQQIGCDIWRDKVRTRRKLLT 517

Human   479 SSEGTLEI-SNIQIEDSGRYTCVAQNVQGADT---------RVATIKVNGTLLDGTQVLKIYVKQ 533
            .|||.:.. ::|........||:...:.|...         |...:...|.:.....::.::.:.
  Fly   518 MSEGEITCPAHIVTVVCAVITCLLVAMIGISVLYYLRFVKRRRKLLHERGPMRTSKSIINVHDRI 582

Human   534 TESH---------SILVSW--KVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDV------HEY 581
            .:.|         |:.:..  .||...||.|....:.|::   .|..|...:|:..      |||
  Fly   583 LQGHNPGGLGLGMSMTLGGGNHVNGLGMTLNYPHHAQTLQ---AHHHYHQAMPLQSHGGNGNHEY 644

Human   582 NLTHLQPSTD------YEVCLTVSN 600
            ..|.| |..|      |....|::|
  Fly   645 QQTTL-PQLDKLELERYLAAQTIAN 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LRRN1NP_065924.3 LRRNT 32..75 CDD:214470 10/42 (24%)
leucine-rich repeat 54..73 CDD:275380 5/18 (28%)
LRR 1 73..95 5/21 (24%)
leucine-rich repeat 74..96 CDD:275380 5/21 (24%)
LRR <89..355 CDD:443914 77/289 (27%)
LRR 2 96..117 6/20 (30%)
leucine-rich repeat 97..120 CDD:275380 6/22 (27%)
LRR 3 120..141 5/20 (25%)
leucine-rich repeat 121..144 CDD:275380 6/22 (27%)
LRR 4 144..165 7/20 (35%)
leucine-rich repeat 145..168 CDD:275380 7/22 (32%)
LRR 5 168..189 5/20 (25%)
leucine-rich repeat 169..192 CDD:275380 5/22 (23%)
LRR 6 192..213 8/44 (18%)
leucine-rich repeat 193..216 CDD:275380 9/46 (20%)
LRR 7 216..237 4/20 (20%)
leucine-rich repeat 217..240 CDD:275380 6/22 (27%)
LRR 8 240..261 9/20 (45%)
leucine-rich repeat 241..264 CDD:275380 9/22 (41%)
LRR 9 264..285 6/20 (30%)
leucine-rich repeat 265..288 CDD:275380 6/22 (27%)
leucine-rich repeat 289..313 CDD:275380 6/23 (26%)
LRR 10 313..335 9/21 (43%)
leucine-rich repeat 314..335 CDD:275380 9/20 (45%)
LRR 11 338..359 3/20 (15%)
leucine-rich repeat 339..362 CDD:275378 3/22 (14%)
leucine-rich repeat 363..375 CDD:275378 4/11 (36%)
LRRCT 371..419 CDD:214507 14/52 (27%)
I-set 429..516 CDD:400151 20/114 (18%)
Ig strand B 443..447 CDD:409562 0/3 (0%)
Ig strand C 456..460 CDD:409562 1/3 (33%)
Ig strand E 483..486 CDD:409562 0/2 (0%)
Ig strand F 496..501 CDD:409562 2/4 (50%)
Ig strand G 509..512 CDD:409562 1/11 (9%)
FN3 531..600 CDD:214495 20/91 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 691..716
FiliNP_001369108.1 LRR 71..>348 CDD:443914 72/276 (26%)
leucine-rich repeat 75..97 CDD:275378 5/21 (24%)
leucine-rich repeat 98..121 CDD:275380 6/22 (27%)
leucine-rich repeat 122..145 CDD:275380 6/22 (27%)
leucine-rich repeat 146..169 CDD:275380 7/22 (32%)
leucine-rich repeat 170..193 CDD:275380 5/22 (23%)
leucine-rich repeat 194..217 CDD:275380 4/22 (18%)
leucine-rich repeat 218..265 CDD:275380 11/46 (24%)
leucine-rich repeat 266..289 CDD:275380 9/22 (41%)
leucine-rich repeat 290..313 CDD:275380 6/22 (27%)
leucine-rich repeat 314..338 CDD:275380 6/23 (26%)
LRR_8 337..397 CDD:404697 15/60 (25%)
leucine-rich repeat 339..360 CDD:275380 9/20 (45%)
Blue background indicates that the domain is not in the aligned region.

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