DRSC/TRiP Functional Genomics Resources

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Protein Alignment WDFY1 and Stam

DIOPT Version :10

Sequence 1:NP_065881.1 Gene:WDFY1 / 57590 HGNCID:20451 Length:410 Species:Homo sapiens
Sequence 2:NP_477448.1 Gene:Stam / 34505 FlyBaseID:FBgn0027363 Length:689 Species:Drosophila melanogaster


Alignment Length:130 Identity:25/130 - (19%)
Similarity:53/130 - (40%) Gaps:44/130 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    14 PVLLSKI--EGH----------QDAVTAALLIPKEDGVITASED-----RTIRVWLKRDSG---- 57
            |.|.:|:  ||:          :.....|..:||:..|:::.::     :.|.:.||.:.|    
  Fly   131 PALYAKLRQEGYDFKNLGDKTSKTVAEKAAALPKDPNVVSSQQEEDDIAKAIELSLKENKGSPKT 195

Human    58 ---------QYWPSIYHTMA-------SPCSAMAYHHDSRRIFVGQDNGAVMEFHVSEDFNKMNF 106
                     ..:||:|.:.|       |..::.|...:.|::      .|:.:|..:|: |::.|
  Fly   196 GSVASTGTASAYPSLYPSFAGTGSSAPSAEASSAPAPEPRKV------RALYDFEAAEE-NELTF 253

Human   107  106
              Fly   254  253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WDFY1NP_065881.1 WD40 16..272 CDD:475233 24/128 (19%)
WD 1 22..61 9/66 (14%)
WD40 repeat 28..67 CDD:293791 11/56 (20%)
WD 2 66..105 8/45 (18%)
WD40 repeat 71..111 CDD:293791 7/36 (19%)
WD 3 112..150
WD40 repeat 117..154 CDD:293791
WD 4 153..192
WD40 repeat 159..197 CDD:293791
WD 5 197..236
WD40 repeat 202..239 CDD:293791
WD 6 240..279
WD40 repeat 246..314 CDD:293791
FYVE_WDFY1 279..354 CDD:277295
WD40 repeat 321..363 CDD:293791
WD 7 364..403
StamNP_477448.1 VHS_STAM 10..141 CDD:340770 3/9 (33%)
SH3_STAM 235..288 CDD:212754 6/26 (23%)
GAT_STAM 337..413 CDD:410593
PHA03247 <436..526 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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