DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KCNT1 and SLO2

DIOPT Version :10

Sequence 1:XP_011517180.1 Gene:KCNT1 / 57582 HGNCID:18865 Length:1283 Species:Homo sapiens
Sequence 2:NP_001097259.2 Gene:SLO2 / 5740325 FlyBaseID:FBgn0261698 Length:1878 Species:Drosophila melanogaster


Alignment Length:1619 Identity:661/1619 - (40%)
Similarity:870/1619 - (53%) Gaps:457/1619 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    91 LLDTAGFKMSDLDSEVLPLPPRY-RFRDLLLGDP------------SFQNDDRVQVEFYVNENTF 142
            |.|.||:     ..:.||..|.. ||...:...|            |.:.|:||:||:|||||||
  Fly    47 LNDLAGY-----PPQQLPTAPAVRRFSKSIFQRPRSMSVWSDISRSSMRLDERVRVEYYVNENTF 106

Human   143 KERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDDPALGIGCWGCP---KQNYSFNDSS 204
            ||||:|:||||||||||||:.:..||||:|:|||:||:||.....|.|:||.   |..:..:...
  Fly   107 KERLQLYFIKNQRSSLRIRIADLFLKLLSCVLYIIRVILDKNPTFITCYGCEVGNKTEFIISAKL 171

Human   205 SE--------INWAPILWVERKMTLWAIQVIVAIISFLETMLLIYLSYKGNIWEQIFRVSFVLEM 261
            :|        |||..||||.|...||.:|:::|::|..::::|.||.||||||:||....|:||:
  Fly   172 TEEEFQENPIINWDAILWVNRPTVLWVLQLLLAMVSLTQSLVLTYLGYKGNIWQQILSFHFILEL 236

Human   262 INTLPFIITIFWPPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCL 326
            :.|:||.:||..|||||||||:||||||||.:||||.||.|||:.::|||:..|:.||..|||||
  Fly   237 VTTIPFALTIVHPPLRNLFIPIFLNCWLAKRSLENMFNDLHRAMQKSQSALSQQLTILSATLLCL 301

Human   327 VFTGGCRTCGIQHLERAG-ENLSLLTSFYFCIVTFSTVGYGDVTPKIWPSQLLVVIMICVALVVL 390
            |||.   .|||||.:||| .:|:|..|.|:.:||||||||||..|.||||||.:||||||||:||
  Fly   302 VFTS---VCGIQHFQRAGHRHLNLFQSTYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVL 363

Human   391 PLQFEELVYLWMERQKSGGNYSRHRAQTEKHVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVIL 455
            |.|||:|.:.||||||.||:||.||||:|||||:|.::|..|.:|||||||||||.|||:|||:|
  Fly   364 PTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQDFYVVLL 428

Human   456 CPTEMDVQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTI 520
            .|.|:|..:|.:||:|:|:|||||:|||.|||.||.||:|:..||||||::||..|:||||..||
  Fly   429 SPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFILAARNYADKTAADEHTI 493

Human   521 LRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKYAMLALNCICPATSTLITLLVHTS 585
            ||:|||||||||.|.||||.:||:|.|||||:|||||:|.|||:||.||.||..|||:|||:|||
  Fly   494 LRSWAVKDFAPNVPQYVQIFRPEHKLHVKFAEHVVCEDEFKYALLANNCTCPGASTLVTLLLHTS 558

Human   586 RGQEGQESPEQWQRMYGRCSGNEVYHIRMGDSKFFREYEGKSFTYAAFHAHKKYGVCLIGLKRED 650
            ||||||:|||:|.|:||:|||||:|||.:|||:||.||||||||||:||:|:||||.|:|::..:
  Fly   559 RGQEGQQSPEEWHRLYGKCSGNEIYHIVLGDSRFFGEYEGKSFTYASFHSHRKYGVALVGVRPAE 623

Human   651 -----NKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKRKKRAF----SGQGLHEGPA 706
                 .::||||||||||:...|||:|::|||||||||:..|.:.....|.    ||.|...|.:
  Fly   624 LPEFYEETILLNPGPRHIMKKDDTCYYMSITKEENSAFVVNQNQTSDPTAAAKEGSGTGGGGGAS 688

Human   707 RLPVH------------------------------SIIASMGTVAMDLQ---------------- 725
            ....|                              |.:.|..|....:.                
  Fly   689 SSASHHHTAATANPTTTITTTVQATTTTISTTFTSSTLLSASTTTATINATSTAAAAPPPVPSVC 753

Human   726 ----------------GTEH--------------------------------------------- 729
                            ||.|                                             
  Fly   754 VRVPHSPSYDSGGGTTGTTHLQPYPYPQSYPQPHPPMQTPDSGEFASLFVPSENPTAVIISDSRQ 818

Human   730 ---------------------------RPTQSGGGGG---------------------------- 739
                                       .|:.:||.||                            
  Fly   819 NLKDTTVTQTAATITTTTLPPPPQTMGSPSMAGGSGGCGGGGLGLGSAHSMGTSLSITPATLTTT 883

Human   740 GSKLALPTENG------------SGSRRPSIAPVLELADSSAL---------------------- 770
            |:.|.:|..|.            .|||||||.||.::..||:.                      
  Fly   884 GNHLDVPFANNPNLLSPDVLNQRRGSRRPSILPVPDMFTSSSFSIAGNDDGEEGDESDDEIDDEM 948

Human   771 --------LPC-----------DLLSDQSEDE--------------------------------- 783
                    :.|           .|:...|||.                                 
  Fly   949 PWRSPSEKIACLGGHFPQSRTYSLIMSSSEDSYQRGCSFCSATASASAAAVAVAVAAAPAPAPAP 1013

Human   784 VTPSDDEGLS------------------------------------------------------- 793
            ..|||..|.|                                                       
  Fly  1014 AYPSDSAGESGTNADSAAMPSEEYLPQLRRRVMKKSYSCDSECRSVPGMGMGMAMGVGLGGGTLA 1078

Human   794 -----------------------------------------------------------VVEY-- 797
                                                                       |.:|  
  Fly  1079 RLAARRRQLQRCSSCSCSTATTTTTPAVAATTAMAAGSGATAFTSSSSVETRRPVRPVWVYDYSC 1143

Human   798 -VKGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNSYEDAKAYGFKNKLIIVSAETAGNG 861
             |||:||.||:||.|||||:||..|.|.|||:|.:.|:|.||.:||.|.::||.||::|:.|.||
  Fly  1144 IVKGFPPVSPFIGVSPTLCYLLKEKKPLCCLQLAQVCEHCSYRNAKEYQWQNKTIILAADYASNG 1208

Human   862 LYNFIVPLRAYYRSRKELNPIVLLLDNKPDHHFLEAICCFPMVYYMEGSVDNLDSLLQCGIIYAD 926
            :||||:||||::||:..||||:|||:.:||..||:|:..||:||:|.||:|.||.||:.||..|:
  Fly  1209 IYNFIIPLRAHFRSKTSLNPIILLLERRPDVAFLDALSYFPLVYWMLGSIDCLDDLLRAGITLAE 1273

Human   927 NLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSITTELTHPSNMRFMQFRAKDSYSLALS 991
            ::|||:||.:.|||||.::|..|||.||.||:.|||:...|||:..||||||||||.|.|:|.||
  Fly  1274 SVVVVNKELSNSAEEDSLSDCNTIVAVQNMFKFFPSIKSITELSQSSNMRFMQFRAHDKYALHLS 1338

Human   992 KLEKRERENGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMITITRLLLGLDTTPGSGYLC 1056
            |:||||:|.||::::|||||||||.|||.|||||||||:|||||:||..|||||:|..||||:|.
  Fly  1339 KMEKREKERGSHISYMFRLPFAAGAVFSASMLDTLLYQAFVKDYVITFVRLLLGIDQAPGSGFLT 1403

Human  1057 AMKITEGDLWIRTYGRLFQKLCSSSAEIPIGIYRTE-------SHV----------FSTSEPHDL 1104
            :|:||:.|:||||||||:|||||::.|||||||||:       |||          ||....|.:
  Fly  1404 SMRITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDTSNADTSHVSNSPVERWGPFSAFSRHCV 1468

Human  1105 RAQSQISVNVEDCEDTRE----VKG----PWGSRAGTGGSSQGRHTGGGDPAEHPLLRRKSLQWA 1161
            |.:..........:.|::    ::|    |.||  .|||:|..|      |...   |::|:...
  Fly  1469 RLRPSYDEETGTPDSTKDSTEMLRGVTYRPPGS--ATGGASSFR------PQPQ---RQRSVNCL 1522

Human  1162 RRLSRKAPKQAGRAAAAEWISQQRLSLYRRSERQELSELVKNRMKHLGLPTTGYDEMNDHQNTLS 1226
            ...|    ::.|.:.:.....:.|.:..::.||.|::.||::||:.|.|||..||::::.:|.||
  Fly  1523 GGCS----ERKGSSYSINLADEARDNHAQQIERAEIANLVRSRMESLNLPTIDYDDVSEKRNHLS 1583

Human  1227 YVLINPPPDTRLEPSDIVYLIRSDPLA-------HVASSSQSRKSSCSH-KL-SSCNPE 1276
            ||:|||..|.:||..|::||:|..|.:       | .|..:|..|.||: .| ::|.|:
  Fly  1584 YVIINPSCDLKLEEGDLIYLVRPSPFSAQKTFERH-NSRRKSNISFCSNINLGATCGPQ 1641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCNT1XP_011517180.1 Ion_trans 207..390 CDD:459842 109/183 (60%)
Ion_trans_2 322..398 CDD:462301 51/76 (67%)
BK_channel_a 552..646 CDD:460947 68/93 (73%)
SLO2NP_001097259.2 Ion_trans_2 <319..363 CDD:462301 29/43 (67%)
BK_channel_a 525..619 CDD:460947 68/93 (73%)

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