DRSC/TRiP Functional Genomics Resources

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Protein Alignment STAMBPL1 and eIF3f2

DIOPT Version :10

Sequence 1:NP_065850.1 Gene:STAMBPL1 / 57559 HGNCID:24105 Length:436 Species:Homo sapiens
Sequence 2:NP_610210.2 Gene:eIF3f2 / 35547 FlyBaseID:FBgn0033069 Length:286 Species:Drosophila melanogaster


Alignment Length:114 Identity:24/114 - (21%)
Similarity:45/114 - (39%) Gaps:34/114 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    96 QQCAVPEKQDIMKKLKEIAFPRTD-ELKNDLLKKYNVEYQEYLQSKNK---------YKAEILKK 150
            ||.|..:.:..:.:|.::.....| :.:.||:.:|   ..:.|..|.|         |.|     
  Fly   181 QQQASKQMERFVPELAQVVDATRDMQHRLDLVLRY---INDVLARKKKPDNVVGRSLYAA----- 237

Human   151 LEHQRLIEAERKRI---------------AQMRQQQLE-SEQFLFFEDQ 183
            |....|:::::.|:               :.|.:.||| ||:....:||
  Fly   238 LTAVPLLDSDKFRVMFNTNLRDMLMAITLSTMIKTQLEISEKLSCMQDQ 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STAMBPL1NP_065850.1 USP8_dimer 28..132 CDD:462647 8/36 (22%)
GBP_C <120..198 CDD:293879 19/89 (21%)
MPN_AMSH_like 266..436 CDD:163697
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 347..360
eIF3f2NP_610210.2 MPN_eIF3f 12..280 CDD:163695 22/106 (21%)
Blue background indicates that the domain is not in the aligned region.

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