DRSC/TRiP Functional Genomics Resources

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Protein Alignment STAMBPL1 and CG4751

DIOPT Version :10

Sequence 1:NP_065850.1 Gene:STAMBPL1 / 57559 HGNCID:24105 Length:436 Species:Homo sapiens
Sequence 2:NP_609495.1 Gene:CG4751 / 34551 FlyBaseID:FBgn0032348 Length:1412 Species:Drosophila melanogaster


Alignment Length:268 Identity:54/268 - (20%)
Similarity:91/268 - (33%) Gaps:91/268 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   189 LARGQMRSQQTSGL--------------------------SEQIDGSALSCFSTHQNNSLLNVFA 227
            ||.|:::|.:|..:                          |.:..|..|..:    .|:.|...|
  Fly   160 LADGKIKSHETETIFLTPSAWAMHCKRIINPDKKSGCGWASVKYKGKKLDAY----KNTYLRKCA 220

Human   228 ------------DQPNKSDATNYA------SHSPPVNRAL----------TPAATLSAVQN-LVV 263
                        |...|:|.....      :|:...||.:          .|..::..:|. |:.
  Fly   221 LQKETPLDDCELDAERKTDTPEIVVKRTVFAHNTVSNRNVVHDANMLIESVPFTSVGKLQPFLIT 285

Human   264 EGLRCVVLPEDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTIT--------HVIVPKQSAGP 320
            .....::|.:..||.        |||  |.||.|.|....|..|::        .....:|.|| 
  Fly   286 VNSSALLLADFHCHL--------TVR--EVCGYLGGTWDMNTHTLSITKTYPCRSTRFDRQRAG- 339

Human   321 DYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPEA--------IAI 377
               ::|...:...:|||  ||.:||.|:||...|..:..|......||:.:..|        :::
  Fly   340 ---EVERDIQKMMIQDQ--LLLVGWYHSHPKFQAEPTLRDCDAQLDYQIKMRGASDLTYTPCVSL 399

Human   378 VCSPKHKD 385
            :.||.:.:
  Fly   400 IISPYYDE 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STAMBPL1NP_065850.1 USP8_dimer 28..132 CDD:462647
GBP_C <120..198 CDD:293879 4/8 (50%)
MPN_AMSH_like 266..436 CDD:163697 34/136 (25%)
JAMM motif. /evidence=ECO:0000255|PROSITE-ProRule:PRU01182 347..360 4/12 (33%)
CG4751NP_609495.1 RAMA 124..220 CDD:465856 10/63 (16%)
MPN_2A_DUB 278..463 CDD:163698 36/146 (25%)
PHA03247 <616..741 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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