DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTK7 and FER

DIOPT Version :9

Sequence 1:NP_001257327.1 Gene:PTK7 / 5754 HGNCID:9618 Length:1078 Species:Homo sapiens
Sequence 2:NP_524288.3 Gene:FER / 41118 FlyBaseID:FBgn0000723 Length:1325 Species:Drosophila melanogaster


Alignment Length:1010 Identity:223/1010 - (22%)
Similarity:377/1010 - (37%) Gaps:276/1010 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   180 GQSNHTVSSKERNLTLRPAGPEHSGLYSCCAHSAFGQACSSQNFTLSIADESFARVVLAPQDVVV 244
            |:..|.    :|..|.:||.|        ...|..|:....|..:.|:...|..|....|..   
  Fly   453 GRGRHF----KRKSTPQPATP--------MTRSRQGRFNKLQPRSQSLGSLSVIRDGNGPSP--- 502

Human   245 ARYEEAMFHCQFSAQPPPSLQWLFEDETPITNRSRPPHLRRATVFANGSLLLTQVRPRNAGIYRC 309
            ||||....|   ..:...|:.:|.|:..  |:.:.||.|.|        |..||..      ..|
  Fly   503 ARYEPITNH---RLRQAASVHYLGEEIA--TSSTNPPDLTR--------LRRTQCS------MLC 548

Human   310 IGQGQRGPPIILEATLHLAEI--------------EDMPLFEPRVFTAGSEERVTCLPPKGLPEP 360
            :|:.:.  |::|.:...|.::              .|:.|.:.:..:...|.:...:.||     
  Fly   549 LGEDEE--PVVLASPAPLTQLTAAVLTNTNNNHIYADLELDKKKDTSPSPECKGEQIQPK----- 606

Human   361 SVWWEHAGVRLPTHGRVYQKGHELVLANIAESDAGVYTCHAANLAGQRRQDVNITVATVPSW--- 422
                 ...:|:..:....|...:..|..|.|.:..:.......|  |...|||...:...:.   
  Fly   607 -----KEQIRIEINQTAPQNSIDAHLDRIDELNRVLDDRLKRTL--QPSDDVNAIESAEENHIQT 664

Human   423 --LKKPQDSQLEEGKPGYLDCLTQATPKPTVVWYRNQMLISEDSRFEVFKNGTLRINSVEVYDGT 485
              |.|..|||.:.......:|   .:.|.|....:..:..|:.|...:|.|              
  Fly   665 RKLAKDPDSQTKRSSSSSSEC---RSSKDTSHSKKRSLSFSQKSISNIFSN-------------- 712

Human   486 WYRCMSSTPAGSIEAQARVQVLEKLKFTPPPQPQQCMEFDKEATVPCS---ATGREKPTIKWERA 547
             .:..|.:|   :....:..:|.:             |.|.:.|.|..   ::|.:.||   ..:
  Fly   713 -LKEFSKSP---LVRMGKNHILNE-------------EQDAKRTQPSQHHHSSGSDCPT---NSS 757

Human   548 DGSSLPEWVTDNAGTLHFARVTRDDAGNYTCIAS--------------NGPQGQIRAHV----QL 594
            ..||     .:|....:.:..:...|...|.|.|              :....:::..|    :.
  Fly   758 SSSS-----NNNNNNKNTSSNSNHSASQSTIITSTITTTITTTTTTTPSKENSRLKFKVPKIQKK 817

Human   595 TVAVFITF----------------------KVEPERTT--------VYQ--GHTA---LLQCEAQ 624
            :.|:..||                      ::.|.::.        |.|  |..|   ...|...
  Fly   818 SKAIRNTFRSKLLNFQLKRSKPCKQCTKRRRIHPSKSVFDFAKEFEVEQPAGSAADEQFCNCPPA 882

Human   625 GDP--KPLIQWKG-KDRILDPTKLGPRMHIFQ--NGSL-------VIHDVAPEDSG--------- 668
            |..  ||.:|..| ||            |.|:  :|.|       :.:|...|||.         
  Fly   883 GQKPVKPSVQISGHKD------------HPFESSSGELDENSDRDIDNDEEEEDSASDDVLSMKD 935

Human   669 RYTCIAGNSCNIK-HTEAPLYVVDKPVPEESEGPGSPPPYKMIQTIGLSVGAAVAYIIAVLGLMF 732
            ...|:...:.:|. .|..|||       ||....|..|..::::.:.......|...|       
  Fly   936 HCYCVPSLAASISLSTNRPLY-------EEEWFHGVLPREEVVRLLNNDGDFLVRETI------- 986

Human   733 YCKKRCKAKRLQKQPEGEEPEM---ECLNG-----------GPLQ-NGQPSAEIQE--------E 774
                           ..||.::   .|.||           |..: .|.|.|.|||        |
  Fly   987 ---------------RNEESQIVLSVCWNGHKHFIVQTTGEGNFRFEGPPFASIQELIMHQYHSE 1036

Human   775 VALTSLGSGPAATNKRHSTSDKMHFPRSSLQPITTLGKSEFGEVFLAKAQGLEEGVAETLVLVKS 839
            :.:| :.||  |..:|....::.......:..:..:|:..||:|:.||.:..:..||     ||:
  Fly  1037 LPVT-VKSG--AILRRPVCRERWELSNDDVVLLERIGRGNFGDVYKAKLKSTKLDVA-----VKT 1093

Human   840 LQ-SKDEQQQLDFRRELEMFGKLNHANVVRLLGLCREAEPHYMVLEYVDLGDLKQFLRISKSKDE 903
            .: :..::|:..|.:|..:..:.:|.|:|:|:|:|.:.:|..:|:|.|..|.|..:||       
  Fly  1094 CRMTLPDEQKRKFLQEGRILKQYDHPNIVKLIGICVQKQPIMIVMELVLGGSLLTYLR------- 1151

Human   904 KLKSQPLSTKQKVALCTQVALGMEHLSNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEY 968
             ..|..|:|:|::.:|...|.||.:|.:...:|:|||||||||..:..||:|..|:|::  ..||
  Fly  1152 -KNSNGLTTRQQMGMCRDAAAGMRYLESKNCIHRDLAARNCLVDLEHSVKISDFGMSRE--EEEY 1213

Human   969 Y---HFRQAWVPLRWMSPEAILEGDFSTKSDVWAFGVLMWEVFTHGEMPHGGQADDEVLADLQAG 1030
            .   ..:|  :|::|.:|||:..|.:::..|||::|:||||:|:.|:.|:.|..:......:..|
  Fly  1214 IVSDGMKQ--IPVKWTAPEALNFGKYTSLCDVWSYGILMWEIFSKGDTPYSGMTNSRARERIDTG 1276

Human  1031 KARLPQPEGCPSKLYRLMQRCWALSPKDRPSFSEI 1065
             .|:|.|:..|.::||||.:|||...:.||.|.||
  Fly  1277 -YRMPTPKSTPEEMYRLMLQCWAADAESRPHFDEI 1310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTK7NP_001257327.1 IG_like 46..120 CDD:214653
IGc2 53..113 CDD:197706
Ig2_PTK7 154..230 CDD:143237 11/49 (22%)
IG_like 239..>309 CDD:214653 17/69 (25%)
Ig 250..310 CDD:143165 12/59 (20%)
IG 348..416 CDD:214652 12/67 (18%)
IGc2 348..406 CDD:197706 8/57 (14%)
I-set 420..506 CDD:254352 14/90 (16%)
Ig 422..506 CDD:299845 14/88 (16%)
I-set 511..596 CDD:254352 15/105 (14%)
IGc2 528..582 CDD:197706 12/70 (17%)
IG_like 606..689 CDD:214653 26/117 (22%)
IGc2 613..677 CDD:197706 20/89 (22%)
PTK_CCK4 798..1071 CDD:133178 89/272 (33%)
STYKc 809..1069 CDD:214568 89/261 (34%)
FERNP_524288.3 F-BAR_Fes_Fer 7..243 CDD:153341
SH2_Fps_family 953..1039 CDD:198224 22/114 (19%)
TyrKc 1063..1311 CDD:197581 89/266 (33%)
PTKc_Fes_like 1067..1315 CDD:270637 89/262 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.