DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTK7 and kin-15

DIOPT Version :9

Sequence 1:NP_001257327.1 Gene:PTK7 / 5754 HGNCID:9618 Length:1078 Species:Homo sapiens
Sequence 2:NP_741035.2 Gene:kin-15 / 174498 WormBaseID:WBGene00002199 Length:488 Species:Caenorhabditis elegans


Alignment Length:401 Identity:105/401 - (26%)
Similarity:185/401 - (46%) Gaps:67/401 - (16%)


- Green bases have known domain annotations that are detailed below.


Human   721 VAYIIAVLGLMFYCKKRCKAKRLQKQP----EGEEPEMECLNGGPLQNGQPSAEIQEEVALTSLG 781
            :..::.::.::.|..||...:.:|...    ....||:.  |...:.:..|..::......|.:.
 Worm    57 ICILLILISVIVYLSKRYSQQMMQSSDNITNRRSNPEVR--NKSNIYDLPPLLDVTSVNEETPIV 119

Human   782 SGPAATNKRHSTSDKMHF-PRSSLQPI------TTLGKSEFGEV----FLAKAQGLEEGVAETL- 834
            ..|  .|:|   .:.:.| ||..:...      ..||...||||    ...:....|....:.| 
 Worm   120 KRP--INER---IENLEFDPRFEIDQAKLEISEDKLGSGFFGEVCYGLLSMRTSNTETDTLQKLS 179

Human   835 VLVKSLQSKD---EQQQLDFRRELEMFGKL-NHANVVRLLGLCRE---AEPHYMVLEYVDLGDLK 892
            |.||  ||.|   |.|:.....|.::...: .:.|::.::|....   :..:.:::|:|:.|||.
 Worm   180 VAVK--QSNDPTQENQEKMIEDETKLMCAIGRNPNILAIIGAVTANSGSARNLLIVEFVECGDLL 242

Human   893 QFLRISKS--KDEKLKSQ-----PLSTKQKV----------------ALCT--------QVALGM 926
            :||...||  |||.:..:     |.|.::|.                :|||        |:|.||
 Worm   243 KFLEEKKSIFKDELVYEKNGYLLPKSIRRKTYMFNENEDDVIEESLDSLCTSDLLSFSYQIAEGM 307

Human   927 EHLSNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAW---VPLRWMSPEAILE 988
            |:|::...||:|||.||.|::..:.::::..||::......||...:..   :|.|||:||.:.|
 Worm   308 EYLASIPCVHRDLALRNVLLNKNKTIRIADFGLARKYQVDGYYRITKGVGTPMPARWMAPEVMRE 372

Human   989 GDFSTKSDVWAFGVLMWEVFTHGEMPHGGQADDEVLADLQAGKARLPQPEGCPSKLYRLMQRCWA 1053
            |..:.|||||::||.::|:|:.||:|:...::.:|...:..|. :||.|:.|..|:|..|::.|.
 Worm   373 GKCTEKSDVWSYGVSLYEMFSLGELPYSNVSNSDVFEHVVQGN-QLPMPQYCHPKMYDRMKQFWN 436

Human  1054 LSPKDRPSFSE 1064
            .....|||||:
 Worm   437 FDATFRPSFSK 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTK7NP_001257327.1 IG_like 46..120 CDD:214653
IGc2 53..113 CDD:197706
Ig2_PTK7 154..230 CDD:143237
IG_like 239..>309 CDD:214653
Ig 250..310 CDD:143165
IG 348..416 CDD:214652
IGc2 348..406 CDD:197706
I-set 420..506 CDD:254352
Ig 422..506 CDD:299845
I-set 511..596 CDD:254352
IGc2 528..582 CDD:197706
IG_like 606..689 CDD:214653
IGc2 613..677 CDD:197706
PTK_CCK4 798..1071 CDD:133178 93/320 (29%)
STYKc 809..1069 CDD:214568 90/302 (30%)
kin-15NP_741035.2 STYKc 147..452 CDD:214568 90/304 (30%)
PTKc 148..453 CDD:270623 90/303 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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