DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PTK6 and src-2

DIOPT Version :9

Sequence 1:NP_005966.1 Gene:PTK6 / 5753 HGNCID:9617 Length:451 Species:Homo sapiens
Sequence 2:NP_493502.1 Gene:src-2 / 173296 WormBaseID:WBGene00005078 Length:507 Species:Caenorhabditis elegans


Alignment Length:443 Identity:184/443 - (41%)
Similarity:272/443 - (61%) Gaps:13/443 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    13 YVGLWDFKSRTDEELSFRAGDVFHVARKEE-QWWWATLLDEAGGAVAQGYVPHNYLAERETVESE 76
            :|.|:.:.:|||::|||:..|:..:....: .||:|.  .:|.|..  ||:|.||:|..:::||:
 Worm    62 FVALFQYDARTDDDLSFKKDDILEILNDTQGDWWFAR--HKATGRT--GYIPSNY
VAREKSIESQ 122

Human    77 PWFFGCISRSEAVRRLQAEGNATGAFLIRVSEKPSADYVLSVRDTQAVRHYKIWRRAGGRLHLNE 141
            ||:||.:.|.:|.:.|....|..||||:|.||....|..||||:..:|:||:|.:...|...:..
 Worm   123 PWYFGKMRRIDAEKCLLHTLNEHGAFLVRDSESRQHDLSLSVRENDSVKHYRIRQLDHGGYFIAR 187

Human   142 AVSFLSLPELVNYHRAQSLSHGLRLAAPCRKHE-PE--PLPHWDDWERPREEFTLCRKLGSGYFG 203
            ...|.:|.:|:.:::.::....:.|.|||.|.| |:  ...:.|.||..|....|.|::|:|.||
 Worm   188 RRPFATLHDLIAHYQREADGLCVNLGAPCAKSEAPQTTTFTYDDQWEVDRRSVRLIRQIGAGQFG 252

Human   204 EVFEGLWKDRVQVAIKVISRDNLLHQQMLQSEIQAMKKLRHKHILALYAVVSVGDPVYIITELMA 268
            ||:||.|...|.||:|.:..........| :|.|.||||||..:|:||||.:..:|:.|:||||.
 Worm   253 EVWEGRWNVNVPVAVKKLKAGTADPTDFL-AEAQIMKKLRHPKLLSLYAVCTRDEPILIVTELMQ 316

Human   269 KGSLLELLRDSDEKVLPVSELLDIAWQVAEGMCYLESQNYIHRDLAARNILVGENTLCKVGDFGL 333
            :..|..|.|...:..:|  :|::|:.|||.||.|||..|:|||||||||||:..:...|:.||||
 Worm   317 ENLLTFLQRRGRQCQMP--QLVEISAQVAAGMAYLEEMNFIHRDLAARNILINNSLSVKIADFGL 379

Human   334 AR-LIKEDVYLSH-DHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFSRGQVPYPGMSNHEA 396
            || |:||:.|.:. ....|.|||||||.:...::||||||||||||.|:.:.|::|||||:|.|.
 Worm   380 ARILMKENEYEARTGARFPIKWTAPEAANYNRFTTKSDVWSFGILLTEIVTFGRLPYPGMTNAEV 444

Human   397 FLRVDAGYRMPCPLECPPSVHKLMLTCWCRDPEQRPCFKALRERLSSFTSYEN 449
            ..:||||||||||..||.:::.:|..||..||::||.|:.|:.:|....:.::
 Worm   445 LQQVDAGYRMPCPAGCPVTLYDIMQQCWRSDPDKRPTFETLQWKLEDLFNLDS 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PTK6NP_005966.1 SH3_Brk 12..69 CDD:212781 19/56 (34%)
SH2_PTK6_Brk 75..174 CDD:198221 34/98 (35%)
Linker 171..190 7/21 (33%)
PTKc_Srm_Brk 184..444 CDD:133248 126/261 (48%)
STYKc 192..441 CDD:214568 122/250 (49%)
src-2NP_493502.1 SH3_Src_like 61..112 CDD:212779 17/53 (32%)
SH2_Src_Src42 120..215 CDD:198233 31/94 (33%)
PTKc_Frk_like 231..496 CDD:270653 127/267 (48%)
Pkinase_Tyr 240..489 CDD:285015 122/251 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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