DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MRTFB and mrtfb

DIOPT Version :10

Sequence 1:NP_001295071.1 Gene:MRTFB / 57496 HGNCID:29819 Length:1099 Species:Homo sapiens
Sequence 2:XP_012826015.1 Gene:mrtfb / 780107 XenbaseID:XB-GENE-487634 Length:1079 Species:Xenopus tropicalis


Alignment Length:1118 Identity:700/1118 - (62%)
Similarity:840/1118 - (75%) Gaps:58/1118 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDHTGAIDTEDEVGPLAHLAPSPQSEAVAHEFQELSLQSSQNLPPLNERKNVLQLRLQQRRTREQ 65
            |:|..|.|.|:|.|.|..||.|||||||||:||||||||.|.||||.||||||||||||||||||
 Frog     1 MNHHMAQDMEEEPGSLLSLASSPQSEAVAHDFQELSLQSVQQLPPLKERKNVLQLRLQQRRTREQ 65

Human    66 LVDQGIMPPLKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHILEETFAEPSLQATQM 130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||:
 Frog    66 LVDQGIMPPLKSPAAFHEQIKSLERARTENFLKHKIRSRPDRSELVRMHILEETLAEPSLQATQL 130

Human   131 KLKRARLADDLNEKIAQRPGPMELVEKNILPVDSSVKEAIIGVGKEDYPHTQGDFSFDEDSSDAL 195
            |||||||||||||||||||||:|||||||||||.||||||. |.:.::|......||||||||||
 Frog   131 KLKRARLADDLNEKIAQRPGPLELVEKNILPVDLSVKEAIT-VSQTNFPENLDTLSFDEDSSDAL 194

Human   196 SPDQPASQESQGSAASPSEPKVSESPSPVTTNTPAQFASVSPTVPEFLKTPPTADQPPPRPAAPV 260
            ||:||||||||||||||.|.|.|.|.||: :||..|..:||..:|:|.|..||||.....|.:. 
 Frog   195 SPEQPASQESQGSAASPGEIKTSGSSSPI-SNTTIQCQTVSSPLPDFFKPSPTADLTTRSPLSS- 257

Human   261 LPTNTVSSAKPGPALVKQSHPKNPNDKHRSKKCKDPKPRVKKLKYHQYIPPDQKGEKNEPQMDSN 325
                  |..||||||:||:..|:. :|.||||.||||||||||||||||||||||||.|.:||||
 Frog   258 ------SVCKPGPALIKQTQSKHA-EKPRSKKSKDPKPRVKKLKYHQYIPPDQKGEKVEAEMDSN 315

Human   326 YARLLQQQQLFLQLQILSQQKQHYNYQTILPAPFKPLNDKNS-NSGNSALNNATP----NTPRQN 385
            ||||||||||||||||||||:||||:|.|||||.|.|..:|| |:..|.:|.:.|    :..|||
 Frog   316 YARLLQQQQLFLQLQILSQQQQHYNFQKILPAPLKSLKKQNSINTTTSNVNASIPSVQCSVSRQN 380

Human   386 TSTPVRKPGPLPSSLDDLKVSELKTELKLRGLPVSGTKPDLIERLKPYQEVNSSGLA--AGGIVA 448
             |.|.:|.|||||:|||:||:|||.|||||||||||||.||||||||:|:.:|:|:|  :|.||.
 Frog   381 -SVPSKKTGPLPSNLDDMKVAELKMELKLRGLPVSGTKMDLIERLKPFQDFSSNGVAPNSGNIVT 444

Human   449 VSSSAIVTSNPEVTVALPVTTLHNTV--TSSVSTLKAELPPTGTSNATRVENVHSPLPISPSPSE 511
            ::::|..|:. :.||....:.|.|:.  |.|||: .|.:...| :|.|.::.::||||:||:|||
 Frog   445 IATTACSTTE-DATVVFSTSALMNSCSPTPSVSS-DASILSVG-NNQTALDGINSPLPMSPAPSE 506

Human   512 QSSLSTDDTNMADTFTEIMTMMSPSQFLSSSPLRMTNNEDSLSPTSSTLSNLELDAAEKDRKLQE 576
            ||:.|::|||:.|||.|||||||||||:::|||::..||||:..|:...:|:||||.||||||||
 Frog   507 QSNFSSEDTNITDTFAEIMTMMSPSQFMNTSPLKVILNEDSMGATNGNTTNMELDAVEKDRKLQE 571

Human   577 KEKQIEELKRKLEQEQKLVEVLKMQLEVEKRGQQQRPLEAQPSAPGHSVKSDQKHGSLGSSIKDE 641
            ||||||:||||||||||||||||.|||:|||||||:|      .|...:|.:.||.:|  .||:|
 Frog   572 KEKQIEDLKRKLEQEQKLVEVLKKQLELEKRGQQQQP------CPNVLLKVEPKHFNL--QIKEE 628

Human   642 ASLPDCSSSRQPIPVASHAVGQP-VSTGGQTLVAKKAVVIKQEVPVGQAEQQSVVSQFYVSSQGQ 705
            .:.|||.:::|.:..:...:||| .:|..|.::|..|:|||.|||:.:::.|:|:.||||:||..
 Frog   629 TAAPDCQNAKQSLVSSGQIIGQPTAATISQNIIANNALVIKHEVPLAKSDHQNVIQQFYVTSQRP 693

Human   706 PPPAVVAQPQALLTTQTAQLLLPVSIQGSSVTSVQLPVGSLKLQTSPQAGMQTQPQIATAAQIP- 769
            |..||||||||||.||||||||||||:..:  .|||.:            :|.||...:.|..| 
 Frog   694 PQTAVVAQPQALLATQTAQLLLPVSIKAPN--GVQLSM------------VQAQPHTVSPAPTPL 744

Human   770 --TAALASGL-AP---TVPQTQDTFPQHVLSQPQQVRKVFTNSASSNTVLPYQRHPAPAVQQPFI 828
              |||..|.: ||   ..|..||.|.||:|:|.||:||: ..||:|..|..|.::|..||.|.|.
 Frog   745 STTAATTSLVQAPQKQPAPLAQDKFTQHLLNQNQQIRKL-CPSATSGNVFSYPQNPVIAVPQSFS 808

Human   829 NKASNSVLQSRNAPLPSLQNGPNTPNKPS-SPPPPQQFVV-QHSLFGSPVAKTKDPPRYEEAIKQ 891
            ...|.:....||..:.::||||.:..:.| :||.||||:| ||.:|..|..|:||||||||||||
 Frog   809 ASLSANAQPQRNTQIAAMQNGPTSLQEESPTPPQPQQFIVQQHPVFSGPTTKSKDPPRYEEAIKQ 873

Human   892 TRSTQAPLPEISNAHSQQMDDLFDILIKSGEISLPIKEEPSPISKMRPVTASITTMPVNTVVSRP 956
            .|:..|..||:|||||||||||||||||||||| |:.:|||||||||||||::||||||||||||
 Frog   874 ARNNPASQPEVSNAHSQQMDDLFDILIKSGEIS-PLIKEPSPISKMRPVTANVTTMPVNTVVSRP 937

Human   957 PPQVQMAPPVSLEPMGSLSASLENQLEAFLDGTLPSANEIPPLQSSSEDREPFSLIEDLQNDLLS 1021
            |||:.:|||::||...|||.|||:||||||||||||.|.||.|:|:|:|||.||||:||.||||.
 Frog   938 PPQIHVAPPLTLESTNSLSVSLESQLEAFLDGTLPSENNIPHLESNSDDRETFSLIDDLNNDLLQ 1002

Human  1022 HSGMLDHSHSPMETSETQFAAGTPCLSLDLSDSNLDNMEWLDITMPNSSSGLTPLSTTAPSMFSA 1086
            :||||||..:|||||:|.|.|.: ||||||:|:|||||||||:|||||:|.|||||:|.|||||.
 Frog  1003 NSGMLDHDSAPMETSDTPFTANS-CLSLDLADANLDNMEWLDLTMPNSASSLTPLSSTLPSMFST 1066

Human  1087 DFLDPQDLPLPWD 1099
            ||||..||.|.|:
 Frog  1067 DFLDSNDLQLHWE 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MRTFBNP_001295071.1 RPEL 52..76 CDD:475195 23/23 (100%)
RPEL 96..119 CDD:460677 22/22 (100%)
RPEL 139..164 CDD:128947 23/24 (96%)
PHA03247 <197..410 CDD:223021 134/217 (62%)
SAP 400..433 CDD:460424 28/32 (88%)
DUF2130 568..>603 CDD:430914 31/34 (91%)
SP1-4_N <649..>826 CDD:425404 79/184 (43%)
mrtfbXP_012826015.1 RPEL 52..76 CDD:475195 23/23 (100%)
RPEL 96..119 CDD:460677 22/22 (100%)
RPEL 140..163 CDD:460677 21/22 (95%)
SAP 394..427 CDD:460424 28/32 (88%)
COG2433 <563..>602 CDD:441980 34/38 (89%)
PHA03247 <693..936 CDD:223021 140/258 (54%)

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