DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF150 and Rnf150

DIOPT Version :10

Sequence 1:XP_005263207.1 Gene:RNF150 / 57484 HGNCID:23138 Length:460 Species:Homo sapiens
Sequence 2:NP_001178022.1 Gene:Rnf150 / 364983 RGDID:1304572 Length:437 Species:Rattus norvegicus


Alignment Length:461 Identity:412/461 - (89%)
Similarity:423/461 - (91%) Gaps:25/461 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAMSLIQACCSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYAEPAPDPGAG-AAGGGG 64
            |.|||||||.||||||||||||||||||||||||||||||||||||||.|  |:.||. |.||||
  Rat     1 MTMSLIQACRSLALSTWLLSFCFVHLLCLDFTVAEKEEWYTAFVNITYTE--PESGAAVAGGGGG 63

Human    65 AELHTEKTECGRYGEHSPKQDARGEVVMASSAHDRLACDPNTKFAAPTRGKNWIALIPKGNCTYR 129
            |||||||:|||||||||||||||||||||||.|||||||||||||||..||:|||||||||||||
  Rat    64 AELHTEKSECGRYGEHSPKQDARGEVVMASSVHDRLACDPNTKFAAPAHGKHWIALIPKGNCTYR 128

Human   130 DKIRNAFLQNASAVVIFNVGSNTNETITMPHAGLMSSHAQPLKLISPCPYSLSSGVEDIVAIMIP 194
            ||||||||||||||||||||||||||||||||                      |||||||||||
  Rat   129 DKIRNAFLQNASAVVIFNVGSNTNETITMPHA----------------------GVEDIVAIMIP 171

Human   195 EPKGKEIVSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRY 259
            ||||||:|||||||:||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   172 EPKGKELVSLLERNVTVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRY 236

Human   260 ANARDRNQRRLGDAAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHK 324
            |||||||||||||||||||||||:|||:||||||||||||||||||||||:||||||||||||||
  Rat   237 ANARDRNQRRLGDAAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPSDVVRILPCRHLFHK 301

Human   325 SCVDPWLLDHRTCPMCKMNILKALGIPPNADCMDDLPTDFEGSLGGPPTNQITGASDTTVNESSV 389
            |||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
  Rat   302 SCVDPWLLDHRTCPMCKMNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSV 366

Human   390 TLDPAVRTVGALQVVQDTDPIPQEGDVIFTTNSEQEPAVSSDSDISLIMAMEVGLSDVELSTDQD 454
            |||||||||||||||||.||.||||:.||||||:||||||||||||||||:||||||||||||||
  Rat   367 TLDPAVRTVGALQVVQDPDPAPQEGEAIFTTNSDQEPAVSSDSDISLIMALEVGLSDVELSTDQD 431

Human   455 CEEVKS 460
            ||||||
  Rat   432 CEEVKS 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF150XP_005263207.1 PA_GRAIL_like 45..215 CDD:239037 133/170 (78%)
RING-H2_RNF150 292..346 CDD:438456 52/53 (98%)
HRD1 <300..433 CDD:227568 125/132 (95%)
Rnf150NP_001178022.1 PA_GRAIL_like 45..192 CDD:239037 133/170 (78%)
RING-H2_RNF150 269..323 CDD:438456 52/53 (98%)

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