Sequence 1: | XP_005263207.1 | Gene: | RNF150 / 57484 | HGNCID: | 23138 | Length: | 460 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_497129.1 | Gene: | H10E21.5 / 175169 | WormBaseID: | WBGene00019185 | Length: | 473 | Species: | Caenorhabditis elegans |
Alignment Length: | 423 | Identity: | 132/423 - (31%) |
---|---|---|---|
Similarity: | 190/423 - (44%) | Gaps: | 135/423 - (31%) |
- Green bases have known domain annotations that are detailed below.
Human 24 VHLLCLDFTVAEKEEWY-TAFVNITYAEPAPDPGAGAAGGGGAELHTEKTECGRYGEHSPKQDAR 87
Human 88 GEVVMASSAHDRLACDPNTKFAAPTR---GKNWIALIPKGNCTYRDKIRNAFLQNA--SAVVIFN 147
Human 148 VGSNTNET----ITMPHAGLMSSHAQPLKLISPCPYSLSSGVEDIVAIMIPEPKGKEIVSLLERN 208
Human 209 ITVTMYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDA 273
Human 274 AKKAISKLQIRTIKKG-DKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTC 337
Human 338 PMCKMNILKALGIPPNADCMDDLPTDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQ 402
Human 403 VVQDTDPIPQEGDVIFTTNSEQEPAVSSDSDIS 435 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RNF150 | XP_005263207.1 | PA_GRAIL_like | 45..215 | CDD:239037 | 28/178 (16%) |
UPF0233 | <229..>254 | CDD:299753 | 21/24 (88%) | ||
zf-RING_2 | 298..341 | CDD:290367 | 27/42 (64%) | ||
H10E21.5 | NP_497129.1 | HRD1 | <150..325 | CDD:227568 | 94/232 (41%) |
RING-H2_GRAIL | 226..273 | CDD:319582 | 31/49 (63%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C161452848 | |
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I5756 |
eggNOG | 1 | 0.900 | - | - | E33208_3BHU7 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3321 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000832 | |
OrthoInspector | 1 | 1.000 | - | - | otm15229 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107948 | |
Panther | 1 | 1.100 | - | - | O | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3602 |
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.680 |