| Sequence 1: | NP_001357401.1 | Gene: | CNOT6 / 57472 | HGNCID: | 14099 | Length: | 557 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_732964.1 | Gene: | twin / 42880 | FlyBaseID: | FBgn0011725 | Length: | 567 | Species: | Drosophila melanogaster |
| Alignment Length: | 539 | Identity: | 310/539 - (57%) |
|---|---|---|---|
| Similarity: | 395/539 - (73%) | Gaps: | 14/539 - (2%) |
- Green bases have known domain annotations that are detailed below.
|
Human 3 KEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSASLWSLTHLTALHLSDNSLSRIP 67
Human 68 SDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPL 132
Human 133 TQDILNLYQEPDGTRRLLNYLLDNLSGTAKRITTEQPPPRSWIMLQEPDRTRPTALFSVMCYNVL 197
Human 198 CDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYSFFLVELKERGYNGF 262
Human 263 FSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIG 327
Human 328 VAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEYSDVKLVQTMMFLSEVKNIIDKASR 392
Human 393 NLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGT 457
Human 458 TNGRITHGFKLQSAYESGLMPYTNYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGC 522
Human 523 PHPLIPSDHFSLFAQLELL 541 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CNOT6 | NP_001357401.1 | leucine-rich repeat | 33..52 | CDD:275378 | 10/18 (56%) |
| LRR | <52..>159 | CDD:227223 | 68/106 (64%) | ||
| LRR 1 | 52..73 | 12/20 (60%) | |||
| leucine-rich repeat | 53..75 | CDD:275378 | 12/21 (57%) | ||
| LRR 2 | 75..96 | 16/20 (80%) | |||
| leucine-rich repeat | 76..98 | CDD:275378 | 16/21 (76%) | ||
| LRR 3 | 98..120 | 16/21 (76%) | |||
| leucine-rich repeat | 99..121 | CDD:275378 | 17/21 (81%) | ||
| LRR 4 | 121..143 | 10/21 (48%) | |||
| leucine-rich repeat | 122..133 | CDD:275378 | 7/10 (70%) | ||
| Nuclease domain. /evidence=ECO:0000250 | 153..557 | 224/389 (58%) | |||
| Deadenylase_CCR4a | 191..540 | CDD:197340 | 206/348 (59%) | ||
| twin | NP_732964.1 | LRR_4 | 74..114 | CDD:289563 | 24/39 (62%) |
| LRR_8 | 75..130 | CDD:290566 | 35/54 (65%) | ||
| leucine-rich repeat | 76..98 | CDD:275378 | 12/21 (57%) | ||
| LRR_4 | 97..136 | CDD:289563 | 27/38 (71%) | ||
| leucine-rich repeat | 99..121 | CDD:275378 | 16/21 (76%) | ||
| leucine-rich repeat | 122..144 | CDD:275378 | 17/21 (81%) | ||
| leucine-rich repeat | 145..156 | CDD:275378 | 7/10 (70%) | ||
| Deadenylase_CCR4 | 209..550 | CDD:197331 | 206/348 (59%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C165143750 | |
| Domainoid | 1 | 1.000 | 416 | 1.000 | Domainoid score | I660 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 636 | 1.000 | Inparanoid score | I830 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG57444 | |
| OrthoDB | 1 | 1.010 | - | - | D208223at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002437 | |
| OrthoInspector | 1 | 1.000 | - | - | otm40774 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101771 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12121 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3216 |
| SonicParanoid | 1 | 1.000 | - | - | X1441 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.900 | |||||