| Sequence 1: | NP_001357401.1 | Gene: | CNOT6 / 57472 | HGNCID: | 14099 | Length: | 557 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_997825.1 | Gene: | cnot6a / 324048 | ZFINID: | ZDB-GENE-030131-2768 | Length: | 557 | Species: | Danio rerio |
| Alignment Length: | 558 | Identity: | 479/558 - (85%) |
|---|---|---|---|
| Similarity: | 525/558 - (94%) | Gaps: | 2/558 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSASLWSLTHLTALHLSDNSLSR 65
Human 66 IPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGN 130
Human 131 PLTQDILNLYQEPDGTRRLLNYLLDNLSGTAKRITTEQPPPRSWIMLQEPDRTRPTALFSVMCYN 195
Human 196 VLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYSFFLVELKERGYN 260
Human 261 GFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDN 325
Human 326 IGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEYSDVKLVQTMMFLSEVKNIIDKA 390
Human 391 SRNLK-SSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTGGVETNHKDFKELRYNESLTNFSCHGK 454
Human 455 NGTTNGRITHGFKLQSAYESGLMPYTNYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNI 519
Human 520 SGCPHPLIPSDHFSLFAQLELLLPFLPQVNGIHLPGRR 557 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CNOT6 | NP_001357401.1 | leucine-rich repeat | 33..52 | CDD:275378 | 14/18 (78%) |
| LRR | <52..>159 | CDD:227223 | 96/106 (91%) | ||
| LRR 1 | 52..73 | 17/20 (85%) | |||
| leucine-rich repeat | 53..75 | CDD:275378 | 18/21 (86%) | ||
| LRR 2 | 75..96 | 20/20 (100%) | |||
| leucine-rich repeat | 76..98 | CDD:275378 | 21/21 (100%) | ||
| LRR 3 | 98..120 | 18/21 (86%) | |||
| leucine-rich repeat | 99..121 | CDD:275378 | 19/21 (90%) | ||
| LRR 4 | 121..143 | 19/21 (90%) | |||
| leucine-rich repeat | 122..133 | CDD:275378 | 10/10 (100%) | ||
| Nuclease domain. /evidence=ECO:0000250 | 153..557 | 341/404 (84%) | |||
| Deadenylase_CCR4a | 191..540 | CDD:197340 | 295/349 (85%) | ||
| cnot6a | NP_997825.1 | LRR_8 | 51..132 | CDD:290566 | 72/80 (90%) |
| LRR_4 | 51..91 | CDD:289563 | 35/39 (90%) | ||
| leucine-rich repeat | 53..75 | CDD:275378 | 18/21 (86%) | ||
| leucine-rich repeat | 76..90 | CDD:275378 | 13/13 (100%) | ||
| EEP | 190..540 | CDD:294334 | 295/349 (85%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C194331496 | |
| Domainoid | 1 | 1.000 | 601 | 1.000 | Domainoid score | I1708 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H69187 | |
| Inparanoid | 1 | 1.050 | 982 | 1.000 | Inparanoid score | I2402 |
| NCBI | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG57444 | |
| OrthoDB | 1 | 1.010 | - | - | D138648at7742 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002437 | |
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 1 | 0.900 | - | - | OOG6_101771 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12121 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3216 |
| SonicParanoid | 1 | 1.000 | - | - | X1441 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 1 | 1.500 | - | - | ||
| 15 | 15.400 | |||||