DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC12A5 and kcc-2

DIOPT Version :10

Sequence 1:NP_001128243.1 Gene:SLC12A5 / 57468 HGNCID:13818 Length:1139 Species:Homo sapiens
Sequence 2:NP_001255279.2 Gene:kcc-2 / 177370 WormBaseID:WBGene00019205 Length:1129 Species:Caenorhabditis elegans


Alignment Length:1150 Identity:502/1150 - (43%)
Similarity:719/1150 - (62%) Gaps:101/1150 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    19 PDP-ESRRHSVADPRHLPGEDVKGDGNPKESSPFIN-STDTEKGKE-----YDGKNMALFEEEMD 76
            |:| .|...:....|...|....|.|...:..|.:: :..|::|.|     .....:||:|::.|
 Worm    52 PEPTSSTSTNTVTSRRSSGGSGSGLGPASKKPPNMHINIPTDEGAERIPLCEQHSPLALYEQDYD 116

Human    77 T-SPMVSSLLSGLANYTNLPQGSREHEEAENNEGGKKKPVQAPRMGTFMGVYLPCLQNIFGVILF 140
            | ...:.::|..|:.|        ...||.:.|..:|....|.:|||.|||:||||||||||:.|
 Worm   117 TQGQKIGTMLRKLSVY--------NATEATSVEADEKPKAAAAKMGTIMGVFLPCLQNIFGVLFF 173

Human   141 LRLTWVVGIAGIMESFCMVFICCSCTMLTAISMSAIATNGVVPAGGSYYMISRSLGPEFGGAVGL 205
            :||.|::|.||:.::|.:|..|.|.|.||:||:||||||||||:||.||||||:||||.|||||:
 Worm   174 IRLAWIIGTAGVFQAFFVVLTCVSVTFLTSISLSAIATNGVVPSGGPYYMISRNLGPELGGAVGI 238

Human   206 CFYLGTTFAGAMYILGTIEILLAYLFPAMAIFKAEDASGEAAAMLNNMRVYGTCVLTCMATVVFV 270
            .||||||.|.:|||.|.|||||.|::|...:|  :|       :.:|.||.||.:|..:..:|..
 Worm   239 LFYLGTTIAASMYITGAIEILLLYIYPQAKLF--DD-------IYHNFRVLGTVLLLILGLIVMA 294

Human   271 GVKYVNKFALVFLGCVILSILAIYAGVIKSAFDPPNFPICLLGNRTLSRHGFDVCAKLAWEGNET 335
            |||:||:.||..:..|||.||:...||........:...|::|:|.:....:  ..|...:.|.|
 Worm   295 GVKFVNRCALPLVIVVILCILSAILGVFVRYDGSDSLKFCMVGDRPVDLSTY--FEKTQVQPNCT 357

Human   336 VTTRLWGLFCSSRFLNATCDEYFTRNN------------VTEIQGIPGAASGLIKENLWSSYLTK 388
             ...|..||||:   |.|||.|:.|..            :.|.:.|.|.|||:..:|||..||..
 Worm   358 -ADGLQDLFCST---NGTCDHYYDRMKNIKVWKSSGMPAIREERAIKGIASGVFFDNLWPKYLRA 418

Human   389 GVIVERSGMTSVGLADGTPIDMDHP-YVFSDMTSYFTLLVGIYFPSVTGIMAGSNRSGDLRDAQK 452
            |.::.:.......|..|     .|| |::::..:.|.:|||::|||.|||||||||||:||||.|
 Worm   419 GEVLSKDRKDKGDLNRG-----GHPSYIYAESVTNFMILVGVFFPSATGIMAGSNRSGNLRDAAK 478

Human   453 SIPTGTILAIATTSAVYISSVVLFGACIEGVVLRDKFGEAVNGNLVVGTLAWPSPWVIVIGSFFS 517
            |||.||:.|...:|.:|:..||||||.:..:.:|||:|.:..|.|::..::||.|.||:.|.|.|
 Worm   479 SIPLGTLAAQNFSSFIYLLGVVLFGASVSEMFIRDKYGRSAMGKLIISEISWPFPQVILFGCFMS 543

Human   518 TCGAGLQSLTGAPRLLQAISRDGIVPFLQVFGHGKANGEPTWALLLTACICEIGILIASLDEVAP 582
            |.|||:|||||||||||||:.|.::|||:.|....:.|||..|:|||..|||.|||||.::.:..
 Worm   544 TAGAGMQSLTGAPRLLQAIAADDVLPFLKPFRKMDSRGEPIRAILLTLAICECGILIAVIENITA 608

Human   583 ILSMFFLMCYMFVNLACAVQTLLRTPNWRPRFRYYHWTLSFLGMSLCLALMFICSWYYALVAMLI 647
            :::.||||||:.||.|||:|:||::|.|||.|||:||:||.:|..||:|:|||.:|::||.|::|
 Worm   609 LITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSLSMIGAILCVAVMFISAWHFALFAIII 673

Human   648 AGLIYKYIEYRGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQLLVLVRVDQDQNVVHP 712
            ...:||||||.|||||||||:|||.|||||:|||.|::.|.|::|||||||||....:..|.  .
 Worm   674 GAGVYKYIEYAGAEKEWGDGLRGLGLSAARFALLNLDDKPQHSRNWRPQLLVLAPDVESANT--N 736

Human   713 QLLSLTSQLKAGKGLTIVGSVLEGTFLENHPQAQRAEESIRRLMEAEKVKGFCQVVISSNLRDGV 777
            .:||..||||||||||:|...:||.:.:|:.:||..:|.::.:::..|:||||.|:::||:.:|:
 Worm   737 GILSFVSQLKAGKGLTLVAHCMEGEYADNYLKAQAVQEKLKAVVKKNKIKGFCDVLVTSNVIEGI 801

Human   778 SHLIQSGGLGGLQHNTVLVGWPRNWRQKEDHQTWRNFIELVRETTAGHLALLVTKNVSMFPGNPE 842
            |.|:|:.||||::||||::.||.:|:.:::......|:..:|..:|...|::|.|....||.|..
 Worm   802 SCLVQTSGLGGMRHNTVVLSWPNDWKAEQEWVVANKFVSAIRAISAAKCAIMVPKYAEKFPANGT 866

Human   843 RFSEGSIDVWWIVHDGGMLMLLPFLLRHHKVWRKCKMRIFTVAQMDDNSIQMKKDLTTFLYHLRI 907
            :.| |.|||||:|||||:|||||||||.||.|:...:|:|.:|||:||::|||.||..|||||||
 Worm   867 KVS-GFIDVWWVVHDGGLLMLLPFLLRQHKTWKNTTVRLFAIAQMEDNNVQMKTDLEKFLYHLRI 930

Human   908 TAEVEVVEMHESDISAYTYEKTLVMEQRSQILKQMHLTKNEREREIQS----ITDESRGS-IRRK 967
            .|.|.|:||.:||||.||||:|:.||:|:|.||  :|.|::|:::||:    :|.|.:.| |..:
 Worm   931 DAAVNVIEMTDSDISDYTYERTMKMEERNQYLK--NLNKSDRDKDIQNHLEIVTRERKLSRINEE 993

Human   968 NPANTRLRLNVPEETAGDSEEKPEEEVQLIHDQSAPSCPSSSPSPGEEPEGEGETDPEKVH---L 1029
            .||      .|||          :..::::.:              |:.:|:.|....|:.   :
 Worm   994 APA------VVPE----------QRNLEVVDE--------------EQEDGKSENGSAKIEHKGV 1028

Human  1030 TWTKDKSVAEKNKGPSPVSSEGIKDFFSMKPEWENLNQSNVRRMHTAVRLNEVIVKKSRDAKLVL 1094
            .::.|:...|...|...:..:        :.|.:...:.||.:|||||:|||::.:||.||:||.
 Worm  1029 RFSDDEDSKEVKVGNGTLERD--------REERQRKRRYNVHKMHTAVKLNELMRQKSSDAQLVF 1085

Human  1095 LNMPGPPRNRNGDENYMEFLEVLTEHLDRVMLVRGGGREVITIYS 1139
            :|:|||| :.:.|..||:|:|.|||.||||:||||.|.||:||||
 Worm  1086 VNLPGPP-DADSDSYYMDFIEALTEGLDRVLLVRGTGAEVVTIYS 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC12A5NP_001128243.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63 11/50 (22%)
2a30 44..1139 CDD:273347 493/1122 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..116 4/23 (17%)
Scissor helix. /evidence=ECO:0000269|PubMed:33199848, ECO:0000269|PubMed:33310850, ECO:0007744|PDB:6M23, ECO:0007744|PDB:7D8Z 667..681 10/13 (77%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 942..1052 21/117 (18%)
kcc-2NP_001255279.2 AA_permease_2 144..1129 CDD:459263 478/1048 (46%)

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