DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TBC1D24 and Tbc1d24

DIOPT Version :10

Sequence 1:NP_001186036.1 Gene:TBC1D24 / 57465 HGNCID:29203 Length:559 Species:Homo sapiens
Sequence 2:XP_038941277.1 Gene:Tbc1d24 / 287110 RGDID:1306143 Length:562 Species:Rattus norvegicus


Alignment Length:562 Identity:523/562 - (93%)
Similarity:543/562 - (96%) Gaps:3/562 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDSPGYNCFVDKDKMDAAIQDLGPKELSCTELQELKQLARQGYWAQSHALRGKVYQRLIRDIPCR 65
            |||||||||||||||||:|||||||||:.||||||||||||||||||||||||||||||||||||
  Rat     1 MDSPGYNCFVDKDKMDASIQDLGPKELNYTELQELKQLARQGYWAQSHALRGKVYQRLIRDIPCR 65

Human    66 TVTPDASVYSDIVGKIVGKHSSSCLPLPEFVDNTQVPSYCLNARGEGAVRKILLCLANQFPDISF 130
            |||||||||||||||||||||||.|||||||||||||:||||.||||||||||||:|||||||||
  Rat    66 TVTPDASVYSDIVGKIVGKHSSSSLPLPEFVDNTQVPTYCLNPRGEGAVRKILLCIANQFPDISF 130

Human   131 CPALPAVVALLLHYSIDEAECFEKACRILACNDPGRRLIDQSFLAFESSCMTFGDLVNKYCQAAH 195
            |||||||||||||||||||||||||||||:|||||::||||||||||||||||||||||||||||
  Rat   131 CPALPAVVALLLHYSIDEAECFEKACRILSCNDPGKKLIDQSFLAFESSCMTFGDLVNKYCQAAH 195

Human   196 KLMVAVSEDVLQVYADWQRWLFGELPLCYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPL 260
            ||||||||||||||:||||||||||||.|||||||||||||||||||||||||||||||||||||
  Rat   196 KLMVAVSEDVLQVYSDWQRWLFGELPLNYFARVFDVFLVEGYKVLYRVALAILKFFHKVRAGQPL 260

Human   261 ESDSVKQDIRTFVRDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALKQKGITVKQKSVSL 325
            |||:||||||.||:|||||||||||||||||||||||||||||||||||||:|||||||||||||
  Rat   261 ESDNVKQDIRMFVKDIAKTVSPEKLLEKAFAIRLFSRKEIQLLQMANEKALRQKGITVKQKSVSL 325

Human   326 SKRQFVHLAVHAENFRSEIVSVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGHE 390
            ||||||||||||||||||||||:||||||||:||||||||||||||||||||||:||||||||||
  Rat   326 SKRQFVHLAVHAENFRSEIVSVKEMRDIWSWIPERFALCQPLLLFSSLQHGYSLSRFYFQCEGHE 390

Human   391 PTLLLIKTTQKEVCGAYLSTDWSERNKFGGKLGFFGTGECFVFRLQPEVQRYEWVVIKHPELTKP 455
            ||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||.
  Rat   391 PTLLLIKTTQKEVCGAYLSTDWSERNKFGGKLSFFGTGECFVFRLQPEVQRYEWVVIKHPELTKA 455

Human   456 PPLMAAEPTAP---LSHSASSDPADRLSPFLAARHFNLPSKTESMFMAGGSDCLIVGGGGGQALY 517
            ....::|..|.   :|||.|||||||||||||||||||||||||||||||:||||:|||||||||
  Rat   456 ASFKSSEAAANPCLISHSVSSDPADRLSPFLAARHFNLPSKTESMFMAGGNDCLIIGGGGGQALY 520

Human   518 IDGDLNRGRTSHCDTFNNQPLCSENFLIAAVEAWGFQDPDTQ 559
            ||||||||||.|||||||||||||:|||||||||||||||||
  Rat   521 IDGDLNRGRTGHCDTFNNQPLCSESFLIAAVEAWGFQDPDTQ 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TBC1D24NP_001186036.1 RabGAP-TBC 48..253 CDD:459855 195/204 (96%)
TLDc 342..554 CDD:214733 191/214 (89%)
Tbc1d24XP_038941277.1 RabGAP-TBC 48..253 CDD:459855 195/204 (96%)
TLDc 342..557 CDD:214733 191/214 (89%)

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