DRSC/TRiP Functional Genomics Resources

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Protein Alignment fynb and Src42A

DIOPT Version :9

Sequence 1:NP_001025140.1 Gene:fynb / 574422 ZFINID:ZDB-GENE-050706-89 Length:544 Species:Danio rerio
Sequence 2:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster


Alignment Length:433 Identity:238/433 - (54%)
Similarity:306/433 - (70%) Gaps:33/433 - (7%)


- Green bases have known domain annotations that are detailed below.


Zfish   111 RKGEKFQIINSTEGDWWDARSLTTGGTGYIPSNYVAPVDSIQAEDWYFGKLGRKDAERQLLSTGN 175
            :||:..::...|.|::.:.:|                        |||.|:.|.:||::||...|
  Fly  1189 KKGKSRRLSEFTRGEFLNEKS------------------------WYFRKIKRIEAEKKLLLPEN 1229

Zfish   176 PRGTFLIRESETTKGAFSLSIRDWDDVKGDHVKHYKIRKLDSGGYYITTRAQFETLQQLVQHYTE 240
            ..|.||||:||:....:|||:||     ||.||||:||:||.||::|..|..|.|||:||:||::
  Fly  1230 EHGAFLIRDSESRHNDYSLSVRD-----GDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSK 1289

Zfish   241 RAAGLCCRLVVPCHKGMPRLTD-LSVKTKDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVA 304
            .:.|||..|..||.:....:|: ||.:|:|.|||.|.||:.:::||:||||:||.|.||..|.||
  Fly  1290 DSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVA 1354

Zfish   305 IKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMGKGSLLDFLK--DGEG 366
            |||||.|||.|:.||.||||||||||.||:|||||.: ||||||:||.|..||||::|:  .|:|
  Fly  1355 IKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKG 1419

Zfish   367 RALKLPNLVDMAAQVAGGMAYIERMNYIHRDLRSANILVGDSLVCKIADFGLARLIEDNEYTARQ 431
            |:||:..|:|||||:|.||||:|..|||||||.:.|:||||..:.|||||||||||:::||.||.
  Fly  1420 RSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARV 1484

Zfish   432 GAKFPIKWTAPEAALYGKFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPQ 496
            ||:|||||||||||.|.||:|||||||||||||||||.||:|||||.|.|||.|||.||||..|.
  Fly  1485 GARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPP 1549

Zfish   497 DCPSSLHELMVQCWKKDAEERPTFEYLQAFLEDYFTATEPQYQ 539
            :|...|:|:|::||.||...|||||.||..|||::|:.:..|:
  Fly  1550 NCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTSDQSDYK 1592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fynbNP_001025140.1 SH3_Fyn_Yrk 92..147 CDD:212939 5/35 (14%)
SH2_Src_Fyn_isoform_a_like 152..252 CDD:198281 48/99 (48%)
PKc_like 268..541 CDD:304357 179/275 (65%)
Pkinase_Tyr 278..527 CDD:285015 168/251 (67%)
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 48/95 (51%)
PTKc_Frk_like 1319..1587 CDD:270653 178/267 (67%)
Pkinase_Tyr 1328..1580 CDD:285015 168/251 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I6487
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52589
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.930

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