DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SCYL1 and Scyl1

DIOPT Version :10

Sequence 1:NP_065731.3 Gene:SCYL1 / 57410 HGNCID:14372 Length:808 Species:Homo sapiens
Sequence 2:XP_006230811.3 Gene:Scyl1 / 293684 RGDID:1307330 Length:879 Species:Rattus norvegicus


Alignment Length:810 Identity:733/810 - (90%)
Similarity:758/810 - (93%) Gaps:6/810 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MWFFARDPVRDFPFELIPEPPEGGLPGPWALHRGRKKATGSPVSIFVYDVKPGAEEQTQVAKAAF 65
            ||||||||||||||||.|||||||.||||.|||||||||||.|||||||||||||||||||||||
  Rat    74 MWFFARDPVRDFPFELNPEPPEGGPPGPWVLHRGRKKATGSAVSIFVYDVKPGAEEQTQVAKAAF 138

Human    66 KRFKTLRHPNILAYIDGLETEKCLHVVTEAVTPLGIYLKARVEAGGLKELEISWGLHQIVKALSF 130
            ||.||||||||||||||||||||||:|||||||||.|||||.|||||||.|:|||||||||||||
  Rat   139 KRLKTLRHPNILAYIDGLETEKCLHIVTEAVTPLGTYLKARAEAGGLKEQELSWGLHQIVKALSF 203

Human   131 LVNDCSLIHNNVCMAAVFVDRAGEWKLGGLDYMYSAQGNGGGPPRKGIPELEQYDPPELADSSGR 195
            |||||:||||||||||||||:|||||||||||||||||||||||.||||||||||||||||||.|
  Rat   204 LVNDCNLIHNNVCMAAVFVDKAGEWKLGGLDYMYSAQGNGGGPPNKGIPELEQYDPPELADSSSR 268

Human   196 VVREKWSADMWRLGCLIWEVFNGPLPRAAALRNPGKIPKTLVPHYCELVGANPKVRPNPARFLQN 260
            .|:||||||||||||||||||||.||||.||||||||||:||.||||||||||||||||||||||
  Rat   269 AVKEKWSADMWRLGCLIWEVFNGSLPRATALRNPGKIPKSLVTHYCELVGANPKVRPNPARFLQN 333

Human   261 CRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFFQELSKSLDAFPEDFCRHKVLPQLLTAFEFGN 325
            ||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
  Rat   334 CRAPGGFMSNRFVETNLFLEEIQIKEPAEKQKFFQELSKSLDSFPEDFCRHKVLPQLLTAFEFGN 398

Human   326 AGAVVLTPLFKVGKFLSAEEYQQKIIPVVVKMFSSTDRAMRIRLLQQMEQFIQYLDEPTVNTQIF 390
            |||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||||
  Rat   399 AGAVVLTPLFKVGKFLSAEEYQQKIIPVVVKMFSSTDRAMRVRLLQQMEQFIQYLDEPTVNTQIF 463

Human   391 PHVVHGFLDTNPAIREQTVKSMLLLAPKLNEANLNVELMKHFARLQAKDEQGPIRCNTTVCLGKI 455
            |||.|||||||||||||||||||||||||:|.||||||:||||||||||:|||||||||||||||
  Rat   464 PHVTHGFLDTNPAIREQTVKSMLLLAPKLSETNLNVELLKHFARLQAKDDQGPIRCNTTVCLGKI 528

Human   456 GSYLSASTRHRVLTSAFSRATRDPFAPSRVAGVLGFAATHNLYSMNDCAQKILPVLCGLTVDPEK 520
            |||||||||||||||||||||:|||||||||||||||||||||||:|||.|||||||||||||||
  Rat   529 GSYLSASTRHRVLTSAFSRATKDPFAPSRVAGVLGFAATHNLYSMDDCAHKILPVLCGLTVDPEK 593

Human   521 SVRDQAFKAIRSFLSKLESVSEDPTQLEEVEKDVHAASSPGMGGAAASWAGWAVTGVSSLTSKLI 585
            ||||||||.||||||||||||||||||.|:|||||||||||.|||||||||||||||||||||||
  Rat   594 SVRDQAFKTIRSFLSKLESVSEDPTQLAEIEKDVHAASSPGTGGAAASWAGWAVTGVSSLTSKLI 658

Human   586 RSHPTTAPTETNIPQRPTPEGVPAPAPTPVPATPTTSGHWETQEEDKDTAEDSSTADRWDDEDWG 650
            |:|||..|:|..:||||.|||.|||||.|..|||.||||.||||||||.||||:|||||||||||
  Rat   659 RTHPTPVPSEAAVPQRPVPEGDPAPAPAPASATPATSGHRETQEEDKDAAEDSATADRWDDEDWG 723

Human   651 SLEQEAESVLAQQDDWSTGGQVSRASQVSNSDHKSSKSPESDWSSWEAEGSWEQGWQEPSSQEPP 715
            ||| ||||||||||||||.||.:||.|||:|||||.   :|.|||||.||||:||||||||.|||
  Rat   724 SLE-EAESVLAQQDDWSTKGQGNRAGQVSHSDHKSL---DSHWSSWEVEGSWDQGWQEPSSVEPP 784

Human   716 PDGTRLASEYNWGGPESSDKGDPFATLSARPSTQPR--PDSWGEDNWEGLETDSRQVKAELARKK 778
            |:||||||||||||.|.||||||||.||.|||||||  |||||||||||||.:||||||||||||
  Rat   785 PEGTRLASEYNWGGAEPSDKGDPFAALSVRPSTQPRPDPDSWGEDNWEGLEAESRQVKAELARKK 849

Human   779 REERRREMEAKRAERKVAKGPMKLGARKLD 808
            ||||||||||||||:|..||||||||||||
  Rat   850 REERRREMEAKRAEKKATKGPMKLGARKLD 879

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCYL1NP_065731.3 PK_SCY1_like 20..296 CDD:270913 256/275 (93%)
HEAT repeat 314..336 CDD:293787 21/21 (100%)
HEAT 1 350..388 36/37 (97%)
HEAT repeat 351..372 CDD:293787 19/20 (95%)
HEAT repeat 384..417 CDD:293787 31/32 (97%)
HEAT 2 389..427 34/37 (92%)
HEAT repeat 427..458 CDD:293787 28/30 (93%)
HEAT repeat 467..499 CDD:293787 30/31 (97%)
HEAT repeat 505..530 CDD:293787 23/24 (96%)
HEAT 3 507..545 36/37 (97%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 540..566 22/25 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 587..646 42/58 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 658..808 125/151 (83%)
Interaction with COPB1. /evidence=ECO:0000250 793..808 11/14 (79%)
Scyl1XP_006230811.3 None

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