DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and PHOX2B

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_003915.2 Gene:PHOX2B / 8929 HGNCID:9143 Length:314 Species:Homo sapiens


Alignment Length:299 Identity:83/299 - (27%)
Similarity:108/299 - (36%) Gaps:92/299 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 VDSQPEDPKMSGLPTASITECTED----------------------SNTPKLAPDK--------- 161
            ::|...:..|:|:.|:|:.....|                      |..|.|.|..         
Human     9 LNSSAYESCMAGMDTSSLASAYADFSSCSQASGFQYNPIRTTFGATSGCPSLTPGSCSLGTLRDH 73

  Fly   162 -----PLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFM 221
                 ..:|.:..:.....|.:.           ||||.||.||..||.||||:|.||||||.:.
Human    74 QSSPYAAVPYKLFTDHGGLNEKR-----------KQRRIRTTFTSAQLKELERVFAETHYPDIYT 127

  Fly   222 REELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALR 286
            ||||:.::.|:||||||||||||||.||.|                       |.|...:.||..
Human   128 REELALKIDLTEARVQVWFQNRRAKFRKQE-----------------------RAAAAAAAAAKN 169

  Fly   287 SSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISRSAIKQFSSTVAAAAAFSAFD 351
            .||.....::....:.:|......|:.|     ..| |.||..|..|........:.|.|..|..
Human   170 GSSGKKSDSSRDDESKEAKSTDPDSTGG-----PGP-NPNPTPSCGANGGGGGGPSPAGAPGAAG 228

  Fly   352 P----------------AIISVAAHQYAAAITNGTVPAG 374
            |                |..:.||...|||...|...||
Human   229 PGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAG 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 38/55 (69%)
OAR 392..410 CDD:461067
PHOX2BNP_003915.2 Homeodomain 99..155 CDD:459649 38/55 (69%)
polyalanine repeat 241..260 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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