DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and Barx2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001414382.1 Gene:Barx2 / 679701 RGDID:1584840 Length:290 Species:Rattus norvegicus


Alignment Length:273 Identity:67/273 - (24%)
Similarity:98/273 - (35%) Gaps:92/273 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 EHVETYSLSPTLHKAAVEPKPKN--------------WLISEDLDVDSQ--PEDPKMSGLPT--- 142
            |.:..||:.|:|   .|.|||.:              .:|:....|.|.  |..|.::.:.|   
  Rat    40 EKLSLYSVCPSL---VVRPKPLHSCTGSPSLRAYPLLSVITRQPTVISHLVPTGPGLTPVNTRHA 101

  Fly   143 --------ASITECTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNF 199
                    |:.......:.||   ..:.|...|..:.:|:..::            |.|||||.|
  Rat   102 VAAEAAAAAAAAAAAAAAETP---GGEALASSESETEQPTPRQK------------KPRRSRTIF 151

  Fly   200 TLDQLNELERLFEETHY---PDAFMREELSQRLGLSEARVQVWFQNRRAKCRK------------ 249
            |..||..||:.|::..|   ||   |.:|:|.|||::.:|:.|:||||.|.:|            
  Rat   152 TELQLMGLEKKFQKQKYLSTPD---RLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTK 213

  Fly   250 -------------------------HENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSS 289
                                     .::|...|.|.|...|  ..|.||  .|..|.|.....|.
  Rat   214 PKGRPKKNSIPTSEEIEAEEKMNSQAQSQEQLGSLQGQEEP--RDPQEP--KACLVPLEVAEPSQ 274

  Fly   290 VPSHPAAATSSNP 302
            .|.....|:|..|
  Rat   275 QPQELPEASSEPP 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 28/58 (48%)
OAR 392..410 CDD:461067
Barx2NP_001414382.1 None
Blue background indicates that the domain is not in the aligned region.

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