Protein Alignment CG34367 and shox

DIOPT Version :10

• Sequence 1: NP_001097140.1
• Gene: CG34367 / 5740879
• FlyBaseID: FBgn0085396
• Length: 420
• Species: Drosophila melanogaster
• Sequence 2: XP_005167911.1
• Gene: shox / 664748
• ZFINID: ZDB-GENE-051030-21
• Length: 304
• Species: Danio rerio
• Alignment Length: 413
• Identity: 148/413 - (35%)
• Similarity: 185/413 - (44%)
• Gaps: 145/413 - (35%)

  Fly     1 MEQLAQFVTKSFEFNLTNNSVHALFNSMTGARLKKPTEVKNSIFINSISSGGSYADTCASGEESV 65
            ||:|..||:|||:.....:|                   |.||         :|.:...||....
Zfish     1 MEELTAFVSKSFDQKTKESS-------------------KESI---------TYREVLESGLARA 37

  Fly    66 DIDITDLSVSESNTILAIDPEPTEESHSQREEHVETYSLSPTLHKAAVE---PKPKNWLISEDLD 127
                .:|..||:|.     .|.||.:::....|         |:|..||   .|.|.:.::...|
Zfish    38 ----RELGNSETNL-----QEITETNNNHCPVH---------LYKEHVELEKEKLKEFSVTRASD 84

  Fly   128 VDSQPEDPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNTKQ 192
                            .|.:|          .||    :|.|..|.          :.:....||
Zfish    85 ----------------GIYDC----------KDK----KEDVKSED----------EDAQSKLKQ 109

  Fly   193 RRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKG 257
            |||||||||:|||||||||:|||||||||||||||||||||||||||||||||||||.|||||||
Zfish   110 RRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKG 174

  Fly   258 FLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSP 322
            .::|:     |:.|:.|||||||::.|||.      |.....:..|..|| ||.|        .|
Zfish   175 VILGT-----ASHLDACRVAPYVNMGALRM------PFQQVQAQLQLEGV-GTHS--------HP 219

  Fly   323 HNHNPAISRSAIKQFSSTVAAAAAFSAFDP-----AIISVAAHQYAAAITNGTVPAGLFSVPQYS 382
            |.|             ..:||.|.:..|.|     .|.|:|....|||.
Zfish   220 HLH-------------PHLAAHAPYLMFPPPPFGLPIASLADSASAAAA---------------- 255

  Fly   383 INLAAFAAAHSKSSSIADLRMKA 405
              :.|.|.::||:|||||||:||
Zfish   256 --VVAAAKSNSKNSSIADLRLKA 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34367	NP_001097140.1	Homeodomain	193..249	CDD:459649	53/55 (96%)
		OAR	392..410	CDD:461067	11/14 (79%)
shox	XP_005167911.1	SCP-1	<1..>145	CDD:114219	71/229 (31%)
		Homeodomain	110..166	CDD:459649	53/55 (96%)