DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and SHOX2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_003021.3 Gene:SHOX2 / 6474 HGNCID:10854 Length:355 Species:Homo sapiens


Alignment Length:217 Identity:48/217 - (22%)
Similarity:65/217 - (29%) Gaps:72/217 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 PEAAQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGRGMKVTSPFKTHFGTA----- 117
            |.|..||...|.|...|:.:..       .||.|||.      |||.:...      |||     
Human   222 PRACDKAAAAPTPPARGKDSQS-------PRSAPSSQ------GRGGRAAG------GTARRRRR 267

  Fly   118 -------ATAIPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHPMYGSGP---- 171
                   .::..:|............|.| ||.|:...:.:|  :..|||.      |.||    
Human   268 RRRRRRSRSSANAPRRRGRRRTKPAPPRG-SSRSLSGAHSSS--DSGGGAP------GPGPEPCS 323

  Fly   172 -----------------MTGVAAAPAAGFYPYLQFAEGNGPVTGYAPLHYPNHMFHYSAPGGNYP 219
                             ....:.:|:.|........|||.......|     |...:|:......
Human   324 ERGHGGHGKRAKERPPRARPASTSPSPGTRGRRGGPEGNSSSRSPGP-----HQGSWSSSRSPSK 383

  Fly   220 HHNGSP------VSLAPSPVIP 235
            .|:.||      .||:|||..|
Human   384 SHSRSPDKRTRSPSLSPSPKKP 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 13/49 (27%)
OAR 392..410 CDD:461067
SHOX2NP_003021.3 Homeodomain 165..221 CDD:459649
OAR 335..351 CDD:461067 1/15 (7%)
Blue background indicates that the domain is not in the aligned region.

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