Protein Alignment CG34367 and Crx

DIOPT Version :10

• Sequence 1: NP_001097140.1
• Gene: CG34367 / 5740879
• FlyBaseID: FBgn0085396
• Length: 420
• Species: Drosophila melanogaster
• Sequence 2: NP_068627.2
• Gene: Crx / 60446
• RGDID: 620511
• Length: 299
• Species: Rattus norvegicus
• Alignment Length: 242
• Identity: 72/242 - (29%)
• Similarity: 115/242 - (47%)
• Gaps: 37/242 - (15%)

  Fly   191 KQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMH 255
            ||||.||.||..||.|||.||.:|.|||.:.|||::.::.|.|:||||||:|||||||:...|..
  Rat    38 KQRRERTTFTRSQLEELEALFAKTQYPDVYAREEVALKINLPESRVQVWFKNRRAKCRQQRQQQK 102

  Fly   256 KGFLVGSRSPP-IATPLEPCRVAPYVSLAALRSSSVPSHPAAATSS-NPQAPGVSGTSSSG-KVV 317
            :     .:.|| :.....|.:  .....:...|:.|.:.|...:.| :|..||.||:.::. ..|
  Rat   103 Q-----QQQPPGVQAKARPAK--RKAGTSPRPSTDVCTDPLGISDSYSPSLPGPSGSPTTAVATV 160

  Fly   318 TVDSPHNHNP---------------------AISRSAIKQFSSTVAAAAA----FSAFDPAIISV 357
            ::.||.:.:|                     |::.:....|.|:.:|.|:    ||..||.:..:
  Rat   161 SIWSPASESPLPEAQRAGLVASGSSLTSAPYAMTYAPASAFCSSPSAYASPSSYFSGLDPYLSPM 225

  Fly   358 AAHQYAAAITNGTVPAGLFSVPQYSINLAAFAAAHSKSSSIADLRMK 404
            .......|::..:.|:...|:.|...:|:  ..::|..|.:..|..|
  Rat   226 VPQLGGPALSPLSGPSVGPSLAQSPTSLS--GQSYSTYSPVDSLEFK 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG34367	NP_001097140.1	Homeodomain	193..249	CDD:459649	34/55 (62%)
		OAR	392..410	CDD:461067	4/13 (31%)
Crx	NP_068627.2	Homeodomain	40..93	CDD:459649	31/52 (60%)
		TF_Otx	164..249	CDD:427350	15/84 (18%)