DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and hoxa5

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001011405.1 Gene:hoxa5 / 496880 XenbaseID:XB-GENE-486061 Length:274 Species:Xenopus tropicalis


Alignment Length:175 Identity:46/175 - (26%)
Similarity:79/175 - (45%) Gaps:20/175 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 AIDPEPTEESHSQREEHVETYSLSPTLHKAAVEPKPKNWLISEDLDVDSQPEDPKMSGLPTASIT 146
            |:...|..:||...:..: |.|.:.|.:.:.........:..:.|...|..||    ..|.:|..
 Frog   104 AVATSPVSDSHQGGKNSI-TNSNNTTSNSSNSSTGTSTHINRDGLGASSGAED----DAPASSDQ 163

  Fly   147 ECTEDSNTPKLAPDKPLLPEECVSPE--PSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELER 209
            ..:::|.:|  ||.        |.|:  |...:.|..  ..::...:.:|:||.:|..|..|||:
 Frog   164 ASSQNSQSP--APS--------VQPQIYPWMRKLHIS--HDNIGGPEGKRARTAYTRYQTLELEK 216

  Fly   210 LFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQM 254
            .|....|.....|.|::..|.|||.::::||||||.|.:| :|::
 Frog   217 EFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK-DNKL 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 23/55 (42%)
OAR 392..410 CDD:461067
hoxa5NP_001011405.1 Homeodomain 200..256 CDD:459649 23/55 (42%)
Blue background indicates that the domain is not in the aligned region.

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