DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and emx1

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001005459.1 Gene:emx1 / 448058 XenbaseID:XB-GENE-920144 Length:233 Species:Xenopus tropicalis


Alignment Length:196 Identity:55/196 - (28%)
Similarity:77/196 - (39%) Gaps:64/196 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 NWLISED------LDVDSQPEDPKMSGLPTASITECTEDSNTPKLA-PDKPLLPEECVSPE---- 172
            |.|.||:      |.....|.:..:||.|:.:....   .|.|:|. |:....|...|.|.    
 Frog    20 NPLSSEEPLRPAALPYPGAPAEAFVSGFPSPAGRSL---YNNPELVFPETVSHPPLTVHPHQLGA 81

  Fly   173 -----------PSRNREHCDPLD----------------------TSLV-----NTKQRRSRTNF 199
                       |    :|.|||:                      .||:     ..|.:|.||.|
 Frog    82 SHLQHPHSFFAP----QHRDPLNFYPWVLRNRFFGHRFQGGDVSQESLLLHGPFARKPKRIRTAF 142

  Fly   200 TLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHE--------NQMHK 256
            :..||..|||.||:.||.....|::|:..|.|||.:|:|||||||.|.::.:        :|..|
 Frog   143 SPSQLLRLERAFEKNHYVVGAERKQLASSLSLSETQVKVWFQNRRTKYKRQKLEEEGPDSDQKKK 207

  Fly   257 G 257
            |
 Frog   208 G 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 28/55 (51%)
OAR 392..410 CDD:461067
emx1NP_001005459.1 Homeodomain 136..192 CDD:459649 28/55 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..233 3/17 (18%)
Blue background indicates that the domain is not in the aligned region.

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