DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and HHEX

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster


Alignment Length:242 Identity:55/242 - (22%)
Similarity:91/242 - (37%) Gaps:38/242 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SVSESNTILAIDPEPTEESH---SQREEHVETYS---------LSPT-LHKAAVEPKPKNWLISE 124
            |::..::..|..|.|:..::   ..||.....|:         |:|| |....:.|.|.:....:
  Fly    56 SLATGSSSAAPTPSPSSATNIYDLSREAAAAQYAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQ 120

  Fly   125 DLDVDSQPE--DPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVS-PEPSRNRE--HCDPLD 184
            .|.:...|.  .|.......|:.......:...:.:|    ...:|.. |.|:....  :|:...
  Fly   121 VLQLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSP----FTMDCEGFPNPASAAAALYCNAYP 181

  Fly   185 T-----SLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRR 244
            .     |....|::..:..||..|...||..|..:.|.....|..|:.:|.|::.:|:.||||||
  Fly   182 AASFYMSNFGVKRKGGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRR 246

  Fly   245 AKCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVP 291
            ||.|:..        :..||.....|:....|.   |.::..|||||
  Fly   247 AKWRRAN--------LSKRSASAQGPIAGAAVG---SPSSASSSSVP 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 20/55 (36%)
OAR 392..410 CDD:461067
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 20/50 (40%)
Blue background indicates that the domain is not in the aligned region.

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