DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34367 and abd-A

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_732176.1 Gene:abd-A / 42037 FlyBaseID:FBgn0000014 Length:590 Species:Drosophila melanogaster


Alignment Length:58 Identity:24/58 - (41%)
Similarity:35/58 - (60%) Gaps:0/58 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 QRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRK 249
            :||.|..:|..|..|||:.|...||.....|.|::..|.|:|.::::||||||.|.:|
  Fly   398 RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 23/55 (42%)
OAR 392..410 CDD:461067
abd-ANP_732176.1 Homeodomain 399..455 CDD:459649 23/55 (42%)
Abdominal-A 456..478 CDD:403567 24/58 (41%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.