DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and phox2a

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_996953.2 Gene:phox2a / 404602 ZFINID:ZDB-GENE-000223-14 Length:280 Species:Danio rerio


Alignment Length:293 Identity:90/293 - (30%)
Similarity:117/293 - (39%) Gaps:79/293 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 ASITECTED------------SNTPKLAPDKPLLPEECV-------SPEPSRNREHCDPLDTSLV 188
            |....|::.            |:.|..|   ||....|.       .|.|.....:....|.|.:
Zfish    25 ADFNSCSQSNGFQYNPIRSGFSSGPACA---PLATASCTLGALREHQPAPYSTVPYKFFSDASGL 86

  Fly   189 N--TKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHE 251
            |  .||||.||.||..||.||||:|.||||||.:.||||:.::.|:||||||||||||||.||.|
Zfish    87 NEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQE 151

  Fly   252 NQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKV 316
            ...:                           :...|||....|:.|.||:........|.|.   
Zfish   152 RAAN---------------------------SKASSSSGGKKPSDARSSSEDDESKESTCSP--- 186

  Fly   317 VTVDSPHNHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISVA----------------AHQYAAA 365
             |.||..|.:...:||::    |...|....|.|.||.||.|                .|.:...
Zfish   187 -TPDSTANMSSPGARSSL----SPSPAPGPASTFSPASISPALKSSPWPSLGSGTPGPTHTHTQE 246

  Fly   366 ITNGTVPAGLFSVPQYSINLAAFAAAHSKSSSI 398
            :.....||...|.|...: |::|   |.|:::|
Zfish   247 LLKAWQPADSMSGPFAGV-LSSF---HRKNNTI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 38/55 (69%)
OAR 392..410 CDD:461067 3/7 (43%)
phox2aNP_996953.2 Homeodomain 93..149 CDD:459649 38/55 (69%)

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