DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and Rhox12

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001020254.1 Gene:Rhox12 / 382282 MGIID:2685994 Length:186 Species:Mus musculus


Alignment Length:176 Identity:48/176 - (27%)
Similarity:76/176 - (43%) Gaps:32/176 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VETYSLSPTLHKAAVEPKPKNWLISEDLDVDSQPE---------DPKMSG---LPTASITECTED 151
            :|.:.:.|..:|.....      |...||.|.:.:         |..::|   |....|.:..:|
Mouse     3 LEPHHVDPNFYKLGENE------IEVTLDADQEADGAAEGGSFGDGSLNGSDKLKCQGIPDDKDD 61

  Fly   152 ----SNTPKLAPDKPLLPEEC-------VSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLN 205
                .....:..|   :.:||       ..|:|...:::........|...:.|.:..||..|||
Mouse    62 VIYVGELKNIGND---IKDECHGSHQGSGDPQPEEKQKNSAAARVPQVRRTRPRIQLGFTPRQLN 123

  Fly   206 ELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHE 251
            |||..||:|.||||..|:.|::.|.|:|::||.||:.|||..||.:
Mouse   124 ELEDFFEKTKYPDALTRKNLAKHLYLAESKVQRWFKKRRAHYRKEQ 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 28/55 (51%)
OAR 392..410 CDD:461067
Rhox12NP_001020254.1 homeodomain 107..169 CDD:238039 30/61 (49%)
Blue background indicates that the domain is not in the aligned region.

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