DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and PDX1

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_000200.1 Gene:PDX1 / 3651 HGNCID:6107 Length:283 Species:Homo sapiens


Alignment Length:238 Identity:62/238 - (26%)
Similarity:87/238 - (36%) Gaps:56/238 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 QPEDPKMSGLPTASITECTEDSNTPKLAP-------DKPL-------LPEECVSPEPSRN--REH 179
            ||..|.....|.|  ....|..:.|.::|       |.|.       ||.:...|.|...  .|.
Human    41 QPPPPPPHPFPGA--LGALEQGSPPDISPYEVPPLADDPAVAHLHHHLPAQLALPHPPAGPFPEG 103

  Fly   180 CDP--LDTS---------LVNTK-------------------QRRSRTNFTLDQLNELERLFEET 214
            .:|  |:..         :.:||                   .:|:||.:|..||.|||:.|...
Human   104 AEPGVLEEPNRVQLPFPWMKSTKAHAWKGQWAGGAYAAEPEENKRTRTAYTRAQLLELEKEFLFN 168

  Fly   215 HYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMH-KGFLVGSRSPPIATPLEPCRVAP 278
            .|.....|.||:..|.|:|..:::||||||.|.:|.|::.. .|..||...  :|.|.:.|.|..
Human   169 KYISRPRRVELAVMLNLTERHIKIWFQNRRMKWKKEEDKKRGGGTAVGGGG--VAEPEQDCAVTS 231

  Fly   279 YVSLAAL-----RSSSVPSHPAAATSSNPQAPGVSGTSSSGKV 316
            ...|.||     ...:||.....|.......||:|.:.....|
Human   232 GEELLALPPPPPPGGAVPPAAPVAAREGRLPPGLSASPQPSSV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 24/55 (44%)
OAR 392..410 CDD:461067
PDX1NP_000200.1 Transactivation domain. /evidence=ECO:0000250 13..73 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..71 8/31 (26%)
Antp-type hexapeptide 118..123 0/4 (0%)
Homeodomain 147..203 CDD:459649 24/55 (44%)
Nuclear localization signal. /evidence=ECO:0000250 197..203 3/5 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..283 19/76 (25%)
Blue background indicates that the domain is not in the aligned region.

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