DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34367 and HOXA4

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_002132.3 Gene:HOXA4 / 3201 HGNCID:5105 Length:320 Species:Homo sapiens


Alignment Length:260 Identity:69/260 - (26%)
Similarity:100/260 - (38%) Gaps:74/260 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 PEPTE-------ESHSQREEHVETYSLSPTLHKAAVEP-KPKNWLISEDLDVDSQPEDPKMSGLP 141
            |:|.:       .:|.....||....|.|.|...||.| .|:.        .::.|..|   |:|
Human   114 PQPEQPPAQAKGPAHGLHASHVLQPQLPPPLQPRAVPPAAPRR--------CEAAPATP---GVP 167

  Fly   142 T-ASITECTEDSNTPKLAPDKPLLPEECVSP--EPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQ 203
            . .|...|      |.|..||..|..:...|  .|...:.|...::.|....:.:||||.:|..|
Human   168 AGGSAPAC------PLLLADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQ 226

  Fly   204 LNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIA 268
            :.|||:.|....|.....|.|::..|.|||.:|::||||||.|.:|.    ||            
Human   227 VLELEKEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKD----HK------------ 275

  Fly   269 TPLEPCRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSPHNH---NPAIS 330
                            |.::.:.|..:|:.|:.|  ||.:.|         .|||.|   :|:.|
Human   276 ----------------LPNTKMRSSNSASASAGP--PGKAQT---------QSPHLHPHPHPSTS 313

  Fly   331  330
            Human   314  313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 25/55 (45%)
OAR 392..410 CDD:461067
HOXA4NP_002132.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..77
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 101..168 15/64 (23%)
Antp-type hexapeptide 194..199 1/4 (25%)
Homeodomain 216..272 CDD:459649 25/55 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 273..320 16/84 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.