DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and CG11294

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_572500.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster


Alignment Length:218 Identity:69/218 - (31%)
Similarity:94/218 - (43%) Gaps:39/218 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 KQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMH 255
            :|||:||.||..||.|||.||::|||||.|:|||::.|:.||||||||||||||||.||......
  Fly    23 RQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARLQL 87

  Fly   256 KGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVD 320
            .......|...:.||       |.:...|::..|.....|...|..|:  .:|..|...::..|.
  Fly    88 LQDAWRMRCLSLGTP-------PVMGGGAVQGGSGNGATARPPSQTPE--NLSSASKDSELAEVG 143

  Fly   321 SPHNHNPAISRSAIKQFSSTVAAAAAFSAFDPAIISV------AAHQYAA---AITNGTVPAGLF 376
            :..|                   :.:|:...||....      ..||.|.   .::.......|:
  Fly   144 NGPN-------------------SGSFTMMHPAFQQQHQQQQHQGHQQATDQDKLSKTYTELKLY 189

  Fly   377 SVPQYSINLAAFAA--AHSKSSS 397
            ..|.:.:.|...||  .||...|
  Fly   190 KAPSHGMELGGMAALSGHSDEGS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 39/55 (71%)
OAR 392..410 CDD:461067 3/6 (50%)
CG11294NP_572500.1 Homeodomain 29..81 CDD:459649 36/51 (71%)

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