DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and emx3

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_571354.1 Gene:emx3 / 30536 ZFINID:ZDB-GENE-990415-53 Length:233 Species:Danio rerio


Alignment Length:192 Identity:46/192 - (23%)
Similarity:66/192 - (34%) Gaps:84/192 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 EDSNTPKLAPDKPLLP-----EECVSPEP------------------------------------ 173
            :|||:...|.|:|:.|     .|.:.|.|                                    
Zfish    17 KDSNSSNAAADEPIRPTALRFTESIHPSPFGSCFQNSGRTLYSSSPEMMFTDPSTHSTNSGLSLR 81

  Fly   174 ------------------------SRNR--------EHCDPLDTSL---VNTKQRRSRTNFTLDQ 203
                                    .|||        :...|.:..|   .:.|.:|.||.|:..|
Zfish    82 HLQIPTQPFFSPHQRDTLNFYPWVLRNRYLGHRFQGDDSSPENLLLHGPFSRKPKRIRTAFSPSQ 146

  Fly   204 LNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHE--------NQMHKG 257
            |..|||.||:.||.....|::|:..|.|:|.:|:|||||||.|.::.:        .|..||
Zfish   147 LLRLERAFEKNHYVVGAERKQLANGLCLTETQVKVWFQNRRTKHKRQKLEEESPDPQQKRKG 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 27/55 (49%)
OAR 392..410 CDD:461067
emx3NP_571354.1 Homeodomain 136..192 CDD:459649 27/55 (49%)
Blue background indicates that the domain is not in the aligned region.

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