DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and otx2b

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_571326.1 Gene:otx2b / 30501 ZFINID:ZDB-GENE-980526-406 Length:289 Species:Danio rerio


Alignment Length:217 Identity:66/217 - (30%)
Similarity:97/217 - (44%) Gaps:49/217 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 KQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMH 255
            ||||.||.||..||:.||.||.:|.|||.|||||::.::.|.|:||||||:|||||||:.:.|..
Zfish    37 KQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQQ 101

  Fly   256 KG----------------------FLVGSRSPPIATPL-------------EPCRVAPYVSLAAL 285
            .|                      ...|..:||.:|.:             .|..::|.....:.
Zfish   102 NGGQNKVRPAKKKSSPAREASSESGASGQFTPPSSTSVPAISTTTAPVSIWSPASISPLSDPLST 166

  Fly   286 RSSSVP-SHPAAATSSNPQAPGVSGTSS------SGKVVTVDSPHNHNPAISRSAIKQFSSTVAA 343
            .||.:. |:|...|.::..:.|.:|::|      .|..:|   |.:|......|.:...||.   
Zfish   167 SSSCMQRSYPMTYTQASGYSQGYAGSTSYFGGMDCGSYLT---PMHHQLTGPGSTLSPMSSN--- 225

  Fly   344 AAAFSAFDPAIISVAAHQYAAA 365
             |..|..:.:..|:....|.|:
Zfish   226 -AVTSHLNQSPASLPTQGYGAS 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 35/55 (64%)
OAR 392..410 CDD:461067
otx2bNP_571326.1 Homeodomain 39..94 CDD:459649 34/54 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..142 8/48 (17%)
TF_Otx 153..234 CDD:427350 19/87 (22%)
Blue background indicates that the domain is not in the aligned region.

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