DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and rx1

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_571300.2 Gene:rx1 / 30472 ZFINID:ZDB-GENE-990415-236 Length:330 Species:Danio rerio


Alignment Length:396 Identity:99/396 - (25%)
Similarity:150/396 - (37%) Gaps:117/396 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SIFINSISSGGSYADTCASGEESVDIDITDLSVSESNTILAIDPEPTEESH----------SQRE 96
            |.|.:.:.:||:...|..   .|:|: |...:..:.:   .::|.....:|          .:.:
Zfish    19 SNFHDMVKAGGAVVGTRV---HSIDV-ILGFNKDQDS---LLNPGANAVAHKVGGESLGEPGKLD 76

  Fly    97 EHVETYSLSPTLHKAAVEPKPKNWLISEDLDVDSQPEDPKMSGLPTASITECTEDSNTPKLAPDK 161
            :.|:.|...|.|...:.:|      ...|.|:.|...|..:..|..|    ...||.:|      
Zfish    77 QRVQPYGHLPPLRDGSEQP------TFHDADMFSNKCDGDLGDLRKA----IESDSKSP------ 125

  Fly   162 PLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELS 226
                               |..|......|.||:||.||..||:||||.||::||||.:.||||:
Zfish   126 -------------------DSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELA 171

  Fly   227 QRLGLSEARVQVWFQNRRAKCRKHEN------QMHKGFLVGSRSPPI---------ATPLEPCRV 276
            .::.|.|.||||||||||||.|:.|.      ::|...::....|.:         :.||:|...
Zfish   172 MKVNLPEVRVQVWFQNRRAKWRRQEKIDASTMKLHDSPMLSFNRPSMHPTVGPMNNSLPLDPWLP 236

  Fly   277 APYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISRSAIKQFSSTV 341
            :|.       ||:.|.|         ..||..|.:..  :.|....|:.           .|...
Zfish   237 SPL-------SSATPVH---------SIPGFMGPTQG--LQTGYPGHSF-----------LSPPQ 272

  Fly   342 AAAAAFSAFDPAIISVAAHQYAAAITNGTVPAGLFSVPQYSINLAAFAAAHSKSSSIADLRMKAK 406
            ..|.:.....|     ..:|.....|:           :|.:.     ....:|||||.||||||
Zfish   273 PMAQSMQPMAP-----PPYQCPPPFTD-----------KYPLE-----DVDQRSSSIAALRMKAK 316

  Fly   407 KHSESL 412
            :|.:|:
Zfish   317 EHIQSM 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 36/55 (65%)
OAR 392..410 CDD:461067 12/17 (71%)
rx1NP_571300.2 Octapeptide motif 37..44 3/7 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..104 7/43 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..142 8/48 (17%)
Homeodomain 138..194 CDD:459649 36/55 (65%)
OAR 302..318 CDD:461067 11/15 (73%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 306..319 10/12 (83%)
Nuclear localization signal. /evidence=ECO:0000255 312..316 3/3 (100%)

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