DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and Dlx4

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001100510.1 Gene:Dlx4 / 303469 RGDID:1308744 Length:238 Species:Rattus norvegicus


Alignment Length:189 Identity:51/189 - (26%)
Similarity:81/189 - (42%) Gaps:49/189 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 SHSQREEHVETYSLSPTLHKAAVEPKPKNWLISEDLDVDSQPEDPKMSGLPTASITECTE----- 150
            |.||...|:.:||.          |.|..       ..||.....:.|..|:....:.||     
  Rat    46 SFSQTYGHLLSYSY----------PGPAT-------PGDSYLSSQQQSAAPSRPFHQPTEHPQEL 93

  Fly   151 DSNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETH 215
            ::.:.|||          :|.|||:         .||.. |.|:.||.::..||..|.:.|:.|.
  Rat    94 EAESEKLA----------LSLEPSQ---------PSLTR-KLRKPRTIYSSLQLQHLNQRFQHTQ 138

  Fly   216 YPDAFMREELSQRLGLSEARVQVWFQNRRAKCRK----HENQMHKGFLVGSRSPPIATP 270
            |.....|.:|:.:|||::.:|::||||:|:|.:|    ...::.:.|   |..||..:|
  Rat   139 YLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQSSGELEEDF---SGRPPSLSP 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 21/55 (38%)
OAR 392..410 CDD:461067
Dlx4NP_001100510.1 Homeodomain 116..172 CDD:459649 21/55 (38%)
Blue background indicates that the domain is not in the aligned region.

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