DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and hoxb2a

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_571191.1 Gene:hoxb2a / 30338 ZFINID:ZDB-GENE-990415-103 Length:390 Species:Danio rerio


Alignment Length:314 Identity:85/314 - (27%)
Similarity:121/314 - (38%) Gaps:51/314 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 INSISSGGSYADTCASGEESVDIDITDLSVSESNTILAIDPEPTEESHSQREEHVETYSLSPTLH 109
            |..|:|..|.|: |.:...:|.......|:.:|..|    |.|.|.:         ..||||...
Zfish     9 IGFINSQPSLAE-CLTSFPAVLESFQTSSIKDSTAI----PPPFEHT---------IPSLSPCTG 59

  Fly   110 KAAVEPKPKNWLISEDLDVDSQPEDPKM---------SGLPTASITECTEDSNTPKLAPDKPLLP 165
            ..| .|:.:....|..|.:.:|...|..         .|.|.|......::..:.|..| ||...
Zfish    60 NQA-RPRSQKRTASNGLQLRTQTAPPTQHQQGPAPLSGGAPLAHEFPWMKEKKSSKKCP-KPGAT 122

  Fly   166 EECVSPEPSR--------NREHCDPLDTSLVNTK-QRRSRTNFTLDQLNELERLFEETHYPDAFM 221
            ....:..||:        ..|....:...|.|.. .||.||.:|..||.|||:.|....|.....
Zfish   123 AAAAAASPSQASSGYTTAGLESPTEIQGGLDNVSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPR 187

  Fly   222 REELSQRLGLSEARVQVWFQNRRAKCRKHENQMHK--------GF--LVG--SRSPPIATPLEPC 274
            |.|::..|.|:|.:|:|||||||.| .|.:...|:        ||  |.|  :.||..:..||  
Zfish   188 RVEIAALLDLTERQVKVWFQNRRMK-HKRQTTHHRDGQEGEPSGFDLLEGTDASSPYSSQSLE-- 249

  Fly   275 RVAPYVSLAALRSSSVPSHPAAATSSNPQAP-GVSGTSSSGKVVTVDSPHNHNP 327
             |:...|.|...|.:.|:..|...||:...| ...|.:|..:..:|.....|:|
Zfish   250 -VSGSGSAAPSESETCPTTAAYTNSSDKSQPTPEEGQASQPEPASVPDTAVHSP 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 26/55 (47%)
OAR 392..410 CDD:461067
hoxb2aNP_571191.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..73 11/46 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..100 2/18 (11%)
Antp-type hexapeptide 103..108 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..155 8/47 (17%)
Homeodomain 159..215 CDD:459649 26/56 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..338 25/96 (26%)
PRK11907 237..>320 CDD:237019 18/69 (26%)
Blue background indicates that the domain is not in the aligned region.

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