DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and gsc

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_571092.1 Gene:gsc / 30212 ZFINID:ZDB-GENE-980528-2060 Length:240 Species:Danio rerio


Alignment Length:221 Identity:61/221 - (27%)
Similarity:91/221 - (41%) Gaps:71/221 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 NTILAIDPEPTEESHSQREEHVETYSLSPTLHKAAVE----------PKP-----------KNWL 121
            ::|||..|...:.....|...|...:|:.:|:.||.:          |.|           .|:.
Zfish     9 DSILAGRPSCKDSVLLHRNAPVVFSNLTESLYTAAGDFNGLYSHTGPPAPNLQSVNGRIGYNNYY 73

  Fly   122 ISEDLDVDSQPEDPKMSG-LPTASITECTEDSNTPKLAPDKPLLP-------EECVSPEPSR--- 175
            ..: |.|.. |..|...| :||....:|             |.:|       ...:||.|.:   
Zfish    74 YGQ-LHVQG-PTGPACCGAIPTLGSQQC-------------PCIPTGYDSAGSVLISPVPHQMMS 123

  Fly   176 ---------------NREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREEL 225
                           |:.||         .::||.||.||.:||..||.||:||.|||...||:|
Zfish   124 YMNVGTLSRTELQLLNQLHC---------RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQL 179

  Fly   226 SQRLGLSEARVQVWFQNRRAKCRKHE 251
            ::::.|.|.:|:|||:|||||.|:.:
Zfish   180 ARKVHLREEKVEVWFKNRRAKWRRQK 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 31/55 (56%)
OAR 392..410 CDD:461067
gscNP_571092.1 Homeodomain 147..203 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 199..240 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.

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