DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34367 and Otp

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001093993.1 Gene:Otp / 294640 RGDID:727945 Length:325 Species:Rattus norvegicus


Alignment Length:313 Identity:102/313 - (32%)
Similarity:138/313 - (44%) Gaps:59/313 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 DLDVDSQP---------EDPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEPSRNREHC 180
            ||..:|.|         ||....|...||:....:|       |||...|:.  .|.||:..:..
  Rat    44 DLAPNSDPVEGATLLPGEDITTVGSTPASLAVSAKD-------PDKQPGPQG--GPNPSQAGQQQ 99

  Fly   181 DPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRA 245
            .       ..||:|.||.||..|||||||.|.:|||||.||||||:.|:||:|:|||||||||||
  Rat   100 G-------QQKQKRHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRA 157

  Fly   246 KCRKHENQMHKGFLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVPSHPAAATSSNPQAPGVSGT 310
            |.:|.:...:.....|:..|....|..|...|  .:.||:..|....|......:....||||  
  Rat   158 KWKKRKKTTNVFRAPGTLLPTPGLPQFPSAAA--AAAAAMGDSLCSFHANDTRWAAAAMPGVS-- 218

  Fly   311 SSSGKVVTVDSPHNHNPAISR-SAIKQFSSTVAAAA-----------AFSAFDPAIISVAAHQYA 363
                   .:..|    ||:.| .|:.|..|..:.||           :.:..:.|  .:.:|.|.
  Rat   219 -------QLPLP----PALGRQQAMAQSLSQCSLAAGPPPNSMGLSNSLAGSNGA--GLQSHLYQ 270

  Fly   364 AAITNGTVPAGLFSVPQYSINLAAFAAAHS----KSSSIADLRMKAKKHSESL 412
            .|.. |.|||.|......|.:....::..|    :.:|||.||.||.:|:.|:
  Rat   271 PAFP-GMVPASLPGPSNVSGSPQLCSSPDSSDVWRGTSIASLRRKALEHTVSM 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 40/55 (73%)
OAR 392..410 CDD:461067 9/21 (43%)
OtpNP_001093993.1 Homeodomain 106..156 CDD:459649 36/49 (73%)
OAR 303..320 CDD:461067 8/16 (50%)

Return to query results.
Submit another query.