DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34367 and Prop1

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_705891.1 Gene:Prop1 / 266738 RGDID:628759 Length:223 Species:Rattus norvegicus


Alignment Length:227 Identity:73/227 - (32%)
Similarity:90/227 - (39%) Gaps:68/227 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 SQREEHVETYSLSPTLHKAAVEPK-PKNWLISEDLDVDSQPEDPK-MSGLPTASITECTEDSNTP 155
            :||....|..:..|...::..|.: ....|||   .||..||..| :||          .....|
  Rat     3 AQRRSQQEKQTKGPVCGRSLPESQAASGTLIS---TVDRSPETSKRLSG----------TGLGRP 54

  Fly   156 KLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAF 220
            ||.              |.|.|.|           .:||.||.|...||.:||..|....|||.:
  Rat    55 KLC--------------PQRGRPH-----------SRRRHRTTFNPAQLGQLESAFGRNQYPDIW 94

  Fly   221 MREELSQRLGLSEARVQVWFQNRRAKCRKHENQM-----------HKGFLVGS-------RSPPI 267
            :||.|:|..||||||:||||||||||.||.|..:           ..|||..|       .:|| 
  Rat    95 VREGLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQPTAHLSPATFSGFLSESSPYPYTYTTPP- 158

  Fly   268 ATPLEPCRVAPYVSLAALRSSSVPSHPAAATS 299
              |..||...||       :.::||.|....|
  Rat   159 --PPVPCFPHPY-------NHALPSQPCTGAS 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 33/55 (60%)
OAR 392..410 CDD:461067
Prop1NP_705891.1 Homeodomain 67..123 CDD:459649 33/55 (60%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.