DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and Prrx2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_006497869.1 Gene:Prrx2 / 20204 MGIID:98218 Length:259 Species:Mus musculus


Alignment Length:280 Identity:88/280 - (31%)
Similarity:122/280 - (43%) Gaps:81/280 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 YSLSPTLHKAAVEPKP-------KNWLISEDLDVDSQPEDPKMSGLPTASITECTE--------D 151
            ::|.|........|.|       ||:.:|..||::......:.:..|.:...|..|        .
Mouse     8 FALDPPAPGPGPPPAPGDCAQARKNFSVSHLLDLEEVAAAGRRAAGPVSGPAEAREGAAREPSGG 72

  Fly   152 SNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHY 216
            |:..:.||.    ..:|.||.....|:           .||||:||.|...||..|||:||.|||
Mouse    73 SSGSEAAPQ----DGDCPSPGRGTKRK-----------KKQRRNRTTFNSSQLQALERVFERTHY 122

  Fly   217 PDAFMREELSQRLGLSEARV------------QVWFQNRRAKCRKHENQMHKGFLVGSRS----- 264
            ||||:||||::|:.||||||            ||||||||||.|::|..|     :.:||     
Mouse   123 PDAFVREELARRVNLSEARVQSTRPCSPHSPSQVWFQNRRAKFRRNERAM-----LATRSASLLK 182

  Fly   265 ---------PPIATPLEPCRVAP-YVSL-AALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVT 318
                     .|:|.  .|..::| |:|. |:...||||  |.:...|:|..|||:..:|...:  
Mouse   183 SYGQEAAIEQPVAP--RPTTMSPDYLSWPASSPYSSVP--PYSPGGSSPATPGVNMANSIASL-- 241

  Fly   319 VDSPHNHNPAISRSAIKQFS 338
                        |...|:||
Mouse   242 ------------RLKAKEFS 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 40/67 (60%)
OAR 392..410 CDD:461067
Prrx2XP_006497869.1 Homeodomain 103..167 CDD:459649 37/63 (59%)
OAR 233..249 CDD:461067 3/29 (10%)
Blue background indicates that the domain is not in the aligned region.

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