DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG34367 and Pitx2

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001035967.1 Gene:Pitx2 / 18741 MGIID:109340 Length:324 Species:Mus musculus


Alignment Length:268 Identity:76/268 - (28%)
Similarity:120/268 - (44%) Gaps:38/268 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 DSNTPKLA-PDKPL--LPEECVSPEPSRNREHCDPLDTSLVNTKQRRSRTNFTLDQLNELERLFE 212
            |:::|::| .||..  ..|:..:.:||:.:             :|||.||:||..||.|||..|:
Mouse    61 DTSSPEVAEKDKGQQGKNEDVGAEDPSKKK-------------RQRRQRTHFTSQQLQELEATFQ 112

  Fly   213 ETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKHENQMHKGFLVGSRSPPIATPLEPCRVA 277
            ...|||...|||::....|:||||:|||:|||||.||.|.............|.....::|    
Mouse   113 RNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQP---- 173

  Fly   278 PYVSLAALRSSSVPSHPAAATSSNPQAPGVSGTSSSGKVVTVDSPHNHNPAISRSAIKQFSSTVA 342
                    .....|.:    :.:|..|.|::..|.|.|.....:..|.||..|:|.....:|..:
Mouse   174 --------YDDMYPGY----SYNNWAAKGLTSASLSTKSFPFFNSMNVNPLSSQSMFSPPNSISS 226

  Fly   343 AAAAFSAFDPAIISVAAHQYAAA--ITNGTVPAGLFSVP----QYSINLAAFAAAHSKSSSIADL 401
            .:.:.|....|:..|......:.  :.|.:.|:...:||    .|:.....:....:.:||:|.|
Mouse   227 MSMSSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPYVYRDTCNSSLASL 291

  Fly   402 RMKAKKHS 409
            |:|||:||
Mouse   292 RLKAKQHS 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 31/55 (56%)
OAR 392..410 CDD:461067 10/18 (56%)
Pitx2NP_001035967.1 Homeodomain 93..149 CDD:459649 31/55 (56%)
OAR 282..299 CDD:461067 8/16 (50%)

Return to query results.
Submit another query.