DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34367 and Pax3

DIOPT Version :10

Sequence 1:NP_001097140.1 Gene:CG34367 / 5740879 FlyBaseID:FBgn0085396 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001152992.1 Gene:Pax3 / 18505 MGIID:97487 Length:484 Species:Mus musculus


Alignment Length:358 Identity:102/358 - (28%)
Similarity:148/358 - (41%) Gaps:83/358 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SVSESNTIL--AIDPEPTEESHSQREEHVET-----YSLSPTLHKAAVEPKPKNWLISEDLDVDS 130
            |||..:.||  .......||:..:|:|..|:     :|:...|.:.|..|:.     .|..|:||
Mouse   150 SVSSISRILRSKFGKGEEEEADLERKEAEESEKKAKHSIDGILSERASAPQS-----DEGSDIDS 209

  Fly   131 QPEDPKMSGLPTASITECTEDSNTPKLAPDKPLLPEECVSPEPSRNREHCDPLDTSLVNTKQRRS 195
            :|:.|                                                    :..|||||
Mouse   210 EPDLP----------------------------------------------------LKRKQRRS 222

  Fly   196 RTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH--ENQ-MHKG 257
            ||.||.:||.||||.||.|||||.:.||||:||..|:||||||||.||||:.||.  .|| |...
Mouse   223 RTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFN 287

  Fly   258 FLVGSRSPPIATPLEPCRVAPYVSLAALRSSSVP---SHPAAATSSNPQAPGVSGTSSSGKVVTV 319
            .|:....||.|.|..|   ...:|..:.:.:|:|   |.| ::|...||....|....|......
Mouse   288 HLIPGGFPPTAMPTLP---TYQLSETSYQPTSIPQAVSDP-SSTVHRPQPLPPSTVHQSTIPSNA 348

  Fly   320 DSPHNHNPAISRSAIKQFS-STVAAAAAFSAFDPAIISVAAHQYAAAITN-GTVPAGLFSVPQYS 382
            ||...:....:|.....:: |.|..:...:..:|.|.:..:.|....:|| |.||    ..||..
Mouse   349 DSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVP----HQPQTD 409

  Fly   383 INLAAFAAAHSKSSSIA---DLRMKAKKHSESL 412
            ..|:........:::::   ..|::..|:.:||
Mouse   410 YALSPLTGGLEPTTTVSASCSQRLEHMKNVDSL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34367NP_001097140.1 Homeodomain 193..249 CDD:459649 39/55 (71%)
OAR 392..410 CDD:461067 2/20 (10%)
Pax3NP_001152992.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PAX 34..159 CDD:128645 4/8 (50%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 37..93
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 113..161 5/10 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..228 23/119 (19%)
Homeodomain 220..276 CDD:459649 39/55 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 309..351 10/42 (24%)
Pax7 347..391 CDD:403540 7/43 (16%)
Blue background indicates that the domain is not in the aligned region.

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